This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ryk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:34, 15 March 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Crystal structure of a putative transcriptional regulator from Listeria monocytogenes EGD-e==
==Crystal structure of a putative transcriptional regulator from Listeria monocytogenes EGD-e==
-
<StructureSection load='4ryk' size='340' side='right' caption='[[4ryk]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
+
<StructureSection load='4ryk' size='340' side='right'caption='[[4ryk]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4ryk]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RYK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RYK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4ryk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RYK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ryk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ryk OCA], [https://pdbe.org/4ryk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ryk RCSB], [https://www.ebi.ac.uk/pdbsum/4ryk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ryk ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ryk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ryk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ryk RCSB], [http://www.ebi.ac.uk/pdbsum/4ryk PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8YA39_LISMO Q8YA39_LISMO]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Anderson, W F]]
+
[[Category: Large Structures]]
-
[[Category: Filippova, E V]]
+
[[Category: Listeria monocytogenes EGD-e]]
-
[[Category: Jedrzejczak, R]]
+
[[Category: Anderson WF]]
-
[[Category: Joachimiak, A]]
+
[[Category: Filippova EV]]
-
[[Category: Kiryukhina, O]]
+
[[Category: Jedrzejczak R]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Minasov, G]]
+
[[Category: Kiryukhina O]]
-
[[Category: Wawrzak, Z]]
+
[[Category: Minasov G]]
-
[[Category: Dna binding protein]]
+
[[Category: Wawrzak Z]]
-
[[Category: Mcsg]]
+
-
[[Category: Psi-biology]]
+

Current revision

Crystal structure of a putative transcriptional regulator from Listeria monocytogenes EGD-e

PDB ID 4ryk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools