This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4s12

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==1.55 Angstrom Crystal Structure of N-acetylmuramic acid 6-phosphate Etherase from Yersinia enterocolitica.==
==1.55 Angstrom Crystal Structure of N-acetylmuramic acid 6-phosphate Etherase from Yersinia enterocolitica.==
-
<StructureSection load='4s12' size='340' side='right' caption='[[4s12]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+
<StructureSection load='4s12' size='340' side='right'caption='[[4s12]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4s12]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Yere1 Yere1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4S12 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4S12 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4s12]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_enterocolitica_subsp._palearctica_Y11 Yersinia enterocolitica subsp. palearctica Y11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4S12 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4S12 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">murQ, Y11_42431 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=930944 YERE1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4s12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4s12 OCA], [https://pdbe.org/4s12 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4s12 RCSB], [https://www.ebi.ac.uk/pdbsum/4s12 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4s12 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-acetylmuramic_acid_6-phosphate_etherase N-acetylmuramic acid 6-phosphate etherase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.126 4.2.1.126] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4s12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4s12 OCA], [http://pdbe.org/4s12 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4s12 RCSB], [http://www.ebi.ac.uk/pdbsum/4s12 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4s12 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/E7B2C4_YERE1 E7B2C4_YERE1]] Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D-lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.[HAMAP-Rule:MF_00068]
+
[https://www.uniprot.org/uniprot/A0A0H2UKZ5_YERE1 A0A0H2UKZ5_YERE1] Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D-lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.[HAMAP-Rule:MF_00068]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: N-acetylmuramic acid 6-phosphate etherase]]
+
[[Category: Large Structures]]
-
[[Category: Yere1]]
+
[[Category: Yersinia enterocolitica subsp. palearctica Y11]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Dubrovska I]]
-
[[Category: Dubrovska, I]]
+
[[Category: Flores K]]
-
[[Category: Flores, K]]
+
[[Category: Grimshaw S]]
-
[[Category: Grimshaw, S]]
+
[[Category: Kwon K]]
-
[[Category: Kwon, K]]
+
[[Category: Minasov G]]
-
[[Category: Minasov, G]]
+
[[Category: Shuvalova L]]
-
[[Category: Shuvalova, L]]
+
-
[[Category: Csgid]]
+
-
[[Category: Lyase]]
+
-
[[Category: National institute of allergy and infectious disease]]
+
-
[[Category: Niaid]]
+

Revision as of 10:38, 15 March 2023

1.55 Angstrom Crystal Structure of N-acetylmuramic acid 6-phosphate Etherase from Yersinia enterocolitica.

PDB ID 4s12

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools