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| <StructureSection load='4w4t' size='340' side='right'caption='[[4w4t]], [[Resolution|resolution]] 1.84Å' scene=''> | | <StructureSection load='4w4t' size='340' side='right'caption='[[4w4t]], [[Resolution|resolution]] 1.84Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4w4t]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"chondromyces_aurantiacus"_(berkeley_and_curtis)_thaxter_1892 "chondromyces aurantiacus" (berkeley and curtis) thaxter 1892]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4W4T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4W4T FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4w4t]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Stigmatella_aurantiaca Stigmatella aurantiaca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4W4T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4W4T FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4w4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4w4t OCA], [https://pdbe.org/4w4t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4w4t RCSB], [https://www.ebi.ac.uk/pdbsum/4w4t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4w4t ProSAT]</span></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4u7w|4u7w]]</td></tr>
| + | |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">mxaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=41 "Chondromyces aurantiacus" (Berkeley and Curtis) Thaxter 1892])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4w4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4w4t OCA], [http://pdbe.org/4w4t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4w4t RCSB], [http://www.ebi.ac.uk/pdbsum/4w4t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4w4t ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q93TX2_STIAU Q93TX2_STIAU] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Barajas, J F]] | + | [[Category: Stigmatella aurantiaca]] |
- | [[Category: Keasling, J D]] | + | [[Category: Barajas JF]] |
- | [[Category: Kliewer, J]] | + | [[Category: Keasling JD]] |
- | [[Category: Luo, R]] | + | [[Category: Kliewer J]] |
- | [[Category: Phelan, R M]] | + | [[Category: Luo R]] |
- | [[Category: Schaub, A J]] | + | [[Category: Phelan RM]] |
- | [[Category: Tsai, S C]] | + | [[Category: Schaub AJ]] |
- | [[Category: Non-ribosomal peptide]]
| + | [[Category: Tsai SC]] |
- | [[Category: Non-ribosomal peptide synthetase]]
| + | |
- | [[Category: Oxidoreductase]]
| + | |
- | [[Category: Polyketide]]
| + | |
- | [[Category: Polyketide synthase]]
| + | |
- | [[Category: Reductase]]
| + | |
- | [[Category: Rossmann fold]]
| + | |
- | [[Category: Short-chain dehydrogenase]]
| + | |
- | [[Category: Thioesterase]]
| + | |
| Structural highlights
Function
Q93TX2_STIAU
Publication Abstract from PubMed
The terminal reductase (R) domain from the non-ribosomal peptide synthetase (NRPS) module MxaA in Stigmatella aurantiaca Sga15 catalyzes a non-processive four-electron reduction to produce the myxalamide family of secondary metabolites. Despite widespread use in nature, a lack of structural and mechanistic information concerning reductive release from polyketide synthase (PKS) and NRPS assembly lines principally limits our ability to redesign R domains with altered or improved activity. Here we report crystal structures for MxaA R, both in the absence and, for the first time, in the presence of the NADPH cofactor. Molecular dynamics simulations were employed to provide a deeper understanding of this domain and further identify residues critical for structural integrity, substrate binding, and catalysis. Aggregate computational and structural findings provided a basis for mechanistic investigations and, in the process, delivered a rationally altered variant with improved activity toward highly reduced substrates.
Comprehensive Structural and Biochemical Analysis of the Terminal Myxalamid Reductase Domain for the Engineered Production of Primary Alcohols.,Barajas JF, Phelan RM, Schaub AJ, Kliewer JT, Kelly PJ, Jackson DR, Luo R, Keasling JD, Tsai SC Chem Biol. 2015 Jul 29. pii: S1074-5521(15)00248-3. doi:, 10.1016/j.chembiol.2015.06.022. PMID:26235055[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Barajas JF, Phelan RM, Schaub AJ, Kliewer JT, Kelly PJ, Jackson DR, Luo R, Keasling JD, Tsai SC. Comprehensive Structural and Biochemical Analysis of the Terminal Myxalamid Reductase Domain for the Engineered Production of Primary Alcohols. Chem Biol. 2015 Jul 29. pii: S1074-5521(15)00248-3. doi:, 10.1016/j.chembiol.2015.06.022. PMID:26235055 doi:http://dx.doi.org/10.1016/j.chembiol.2015.06.022
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