This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4wqe

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:21, 7 April 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Thiosulfate dehydrogenase (TsdA) from Allochromatium vinosum - K208G mutant==
==Thiosulfate dehydrogenase (TsdA) from Allochromatium vinosum - K208G mutant==
-
<StructureSection load='4wqe' size='340' side='right' caption='[[4wqe]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+
<StructureSection load='4wqe' size='340' side='right'caption='[[4wqe]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4wqe]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WQE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WQE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4wqe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Allochromatium_vinosum_DSM_180 Allochromatium vinosum DSM 180]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WQE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WQE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=THJ:THIOSULFATE'>THJ</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSS:S-MERCAPTOCYSTEINE'>CSS</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=THJ:THIOSULFATE'>THJ</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSS:S-MERCAPTOCYSTEINE'>CSS</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wqe OCA], [https://pdbe.org/4wqe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wqe RCSB], [https://www.ebi.ac.uk/pdbsum/4wqe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wqe ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4wq7|4wq7]]</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thiosulfate_dehydrogenase Thiosulfate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.2.2 1.8.2.2] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wqe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wqe OCA], [http://pdbe.org/4wqe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wqe RCSB], [http://www.ebi.ac.uk/pdbsum/4wqe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wqe ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TSDA_ALLVD TSDA_ALLVD]] Catalyzes the oxidation of 2 molecules of thiosulfate to tetrathionate.<ref>PMID:16995898</ref> <ref>PMID:22779704</ref>
+
[https://www.uniprot.org/uniprot/TSDA_ALLVD TSDA_ALLVD] Catalyzes the oxidation of 2 molecules of thiosulfate to tetrathionate.<ref>PMID:16995898</ref> <ref>PMID:22779704</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thiosulfate dehydrogenase]]
+
[[Category: Allochromatium vinosum DSM 180]]
-
[[Category: Archer, M]]
+
[[Category: Large Structures]]
-
[[Category: Brito, J A]]
+
[[Category: Archer M]]
-
[[Category: Dahl, C]]
+
[[Category: Brito JA]]
-
[[Category: Denkmann, K]]
+
[[Category: Dahl C]]
-
[[Category: Pereira, I A.C]]
+
[[Category: Denkmann K]]
-
[[Category: C-type cytochrome]]
+
[[Category: Pereira IAC]]
-
[[Category: Oxidoreductase]]
+
-
[[Category: Tetrathionate]]
+
-
[[Category: Tsda]]
+

Current revision

Thiosulfate dehydrogenase (TsdA) from Allochromatium vinosum - K208G mutant

PDB ID 4wqe

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools