1c8e

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==FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE==
==FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE==
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<StructureSection load='1c8e' size='340' side='right' caption='[[1c8e]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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<StructureSection load='1c8e' size='340' side='right'caption='[[1c8e]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1c8e]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Feline_parvovirus Feline parvovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C8E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C8E FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1c8e]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Feline_parvovirus Feline parvovirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C8E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C8E FirstGlance]. <br>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1fpv|1fpv]], [[4dpv|4dpv]], [[2cas|2cas]], [[1ijs|1ijs]], [[1mvm|1mvm]], [[1c8d|1c8d]], [[1c8f|1c8f]], [[1c8g|1c8g]], [[1c8h|1c8h]]</td></tr>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c8e OCA], [https://pdbe.org/1c8e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c8e RCSB], [https://www.ebi.ac.uk/pdbsum/1c8e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c8e ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c8e OCA], [http://pdbe.org/1c8e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1c8e RCSB], [http://www.ebi.ac.uk/pdbsum/1c8e PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CAPSD_FPV19 CAPSD_FPV19] Capsid protein self-assembles to form an icosahedral capsid with a T=1 symmetry, about 22 nm in diameter, and consisting of 60 copies of two size variants of the capsid proteins, VP1 and VP2, which differ by the presence of an N-terminal extension in the minor protein VP1. The capsid encapsulates the genomic ssDNA. Capsid proteins are responsible for the attachment to host cell receptors. This attachment induces virion internalization predominantly through clathrin-dependent endocytosis. Binding to the host receptors also induces capsid rearrangements leading to surface exposure of VP1 N-terminus, specifically its phospholipase A2-like region and putative nuclear localization signal(s). VP1 N-terminus might serve as a lipolytic enzyme to breach the endosomal membrane during entry into host cell and might contribute to virus transport to the nucleus (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/1c8e_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c8/1c8e_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1c8e ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
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==See Also==
==See Also==
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*[[Virus coat protein|Virus coat protein]]
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Feline parvovirus]]
[[Category: Feline parvovirus]]
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[[Category: Rossmann, M G]]
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[[Category: Large Structures]]
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[[Category: Simpson, A A]]
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[[Category: Rossmann MG]]
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[[Category: Beta barrel]]
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[[Category: Simpson AA]]
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[[Category: Icosahedral symmetry]]
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[[Category: Icosahedral virus]]
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[[Category: Viral capsid]]
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[[Category: Virus]]
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Current revision

FELINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE

PDB ID 1c8e

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