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Green Fluorescent Protein 3D structures

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3D structures of Green Fluorescent Protein

(Updated on 20-April-2023)

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

Retrieved from "http://52.214.119.220/wiki/index.php/Green_Fluorescent_Protein_3D_structures"

Category: Topic Page

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 (Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}})
 {{#tree:id=OrganizedByTopic|openlevels=0|
 * Green Fluorescent Protein
-**[[2qu1]], [[2h9w]], [[5t3i]], [[5dy6]], [[5dtz]], [[5dtx]], [[5btt]], [[5bt0]], [[4xow]], [[4pfe]], [[6as9]], [[5wwk]], [[5o89]], [[5jzl]], [[5jzk]], [[6qq8]], [[6qq9]], [[6qqa]], [[6qqb]] – jGFP - jellyfish<br />
+**[[2qu1]], [[2h9w]], [[4tzg]], [[5t3i]], [[5dy6]], [[5dtz]], [[5dtx]], [[5btt]], [[5bt0]], [[4xow]], [[4pfe]], [[5nhn]], [[6as9]], [[5wwk]], [[5o89]], [[5jzl]], [[5jzk]], [[6qq8]], [[6qq9]], [[6qqa]], [[6qqb]], [[6pfr]], [[6pfs]], [[6pft]], [[6pfu]], [[6t39]], [[6t3a]], [[7a7k]], [[7a7l]], [[7a7s]], [[7a7t]], [[7a7u]], [[7a7x]] – jGFP - jellyfish<br />
-**[[3la1]], [[3i19]], [[2wur]], [[3gex]], [[2qrf]], [[2qt2]], [[2qz0]], [[2gj2]], [[3cb9]], [[3cbe]], [[3cd1]], [[3cd9]], [[2hjo]], [[2hqz]], [[2hrs]], [[2okw]], [[2oky]], [[2q57]], [[2due]], [[2duf]], [[2dug]], [[2duh]], [[2dui]], [[2hcg]], [[2hfc]], [[2hgd]], [[2hgy]], [[2awj]], [[2awk]], [[2awl]], [[2awm]], [[2g16]], [[2g2s]], [[2g3d]], [[2g5z]], [[2g6e]], [[2ah8]], [[2aha]], [[2fwq]], [[2fzu]], [[1z1p]], [[1z1q]], [[1yhg]], [[1yhh]], [[1yhi]], [[1yj2]], [[1yjf]], [[1s6z]], [[1q4a]], [[1q4b]], [[1q4c]], [[1q4d]], [[1q4e]], [[1q73]], [[1qyf]], [[1qyo]], [[1qyq]], [[1qst]], [[1qy3]], [[1cv7]], [[1jc0]], [[1jc1]],  [[1jby]], [[1jbz]], [[1kp5]], [[1kyp]], [[1hcj]], [[1h6r]], [[1b9c]], [[1c4f]], [[1emc]], [[1eme]], [[1emf]], [[1emk]], [[1eml]], [[1emm]], [[2emd]], [[2emn]], [[2emo]], [[1emb]], [[1gfl]], [[1ema]], [[2y0g]], [[3gj1]], [[3gj2]], [[3p28]], [[1qxt]], [[3sry]], [[3ssp]], [[3st0]], [[3ufz]], [[3ug0]], [[4eul]], [[4ges]], [[4j88]], [[4j89]], [[4j8a]], [[3w1c]], [[3w1d]], [[4h47]], [[4h48]], [[4jfg]], [[4lw5]], [[4ka9]], [[4kag]], [[4kex]], [[4n3d]], [[4ogs]], [[4p1q]], [[5hzo]], [[5hw9]], [[5hge]], [[5hbd]], [[5ehu]], [[5dpj]], [[5dpi]], [[5dpg]], [[5dph]], [[6b7t]], [[6b7r]], [[5wj4]], [[5wj3]], [[5wj2]], [[5o8c]], [[5o8b]], [[5o8a]], [[5n9o]], [[5mse]], [[6jgj]], [[6jgi]], [[6jgh]], [[6ir7]], [[6ir6]], [[6grm]], [[6gqh]], [[6gqg]], [[6go9]], [[6go8]], [[6fww]], [[6dq1]], [[6aa6]], [[6aa2]], [[5yr2]], [[5ni3]] – jGFP (mutant)<br />
+**[[3la1]], [[3i19]], [[2wur]], [[3gex]], [[2qrf]], [[2qt2]], [[2qz0]], [[2gj2]], [[3cb9]], [[3cbe]], [[3cd1]], [[3cd9]], [[2hjo]], [[2hqz]], [[2hrs]], [[2okw]], [[2oky]], [[2q57]], [[2due]], [[2duf]], [[2dug]], [[2duh]], [[2dui]], [[2hcg]], [[2hfc]], [[2hgd]], [[2hgy]], [[2awj]], [[2awk]], [[2awl]], [[2awm]], [[2g16]], [[2g2s]], [[2g3d]], [[2g5z]], [[2g6e]], [[2ah8]], [[2aha]], [[2fwq]], [[2fzu]], [[1z1p]], [[1z1q]], [[1yhg]], [[1yhh]], [[1yhi]], [[1yj2]], [[1yjf]], [[1s6z]], [[1q4a]], [[1q4b]], [[1q4c]], [[1q4d]], [[1q4e]], [[1q73]], [[1qyf]], [[1qyo]], [[1qyq]], [[1qst]], [[1qy3]], [[1cv7]], [[1jc0]], [[1jc1]],  [[1jby]], [[1jbz]], [[1kp5]], [[1kyp]], [[1hcj]], [[1h6r]], [[1b9c]], [[1c4f]], [[1emc]], [[1eme]], [[1emf]], [[1emk]], [[1eml]], [[1emm]], [[2emd]], [[2emn]], [[2emo]], [[1emb]], [[1gfl]], [[1ema]], [[2y0g]], [[3gj1]], [[3gj2]], [[3p28]], [[1qxt]], [[3sry]], [[3ssp]], [[3st0]], [[3ufz]], [[3ug0]], [[4eul]], [[4ges]], [[4j88]], [[4j89]], [[4j8a]], [[3w1c]], [[3w1d]], [[4h47]], [[4h48]], [[4jfg]], [[4lw5]], [[4ka9]], [[4kag]], [[4kex]], [[4l12]], [[4l13]], [[4l1i]], [[4n3d]], [[4ogs]], [[4p1q]], [[5hzo]], [[5hw9]], [[5hge]], [[5hbd]], [[5ehu]], [[5dpj]], [[5dpi]], [[5dpg]], [[5dph]], [[6b7t]], [[6b7r]], [[5wj4]], [[5wj3]], [[5wj2]], [[5o8c]], [[5o8b]], [[5o8a]], [[5n9o]], [[5mse]], [[6fll]], [[6jgj]], [[6jgi]], [[6jgh]], [[6ir7]], [[6ir6]], [[6grm]], [[6gqh]], [[6gqg]], [[6go9]], [[6go8]], [[6fww]], [[6dq1]], [[6aa6]], [[6aa2]], [[5yr2]], [[5ni3]], [[6hut]], [[6kkz]], [[6kl0]], [[6kl1]], [[6krg]], [[6l27]], [[6quh]], [[6qui]], [[6quj]], [[6uhj]], [[6uhk]], [[6uhl]], [[6uhm]], [[6uhn]], [[6uho]], [[6uhp]], [[6uhq]], [[6uhr]], [[6un4]], [[6un5]], [[6vio]], [[6zsm]], [[6zsn]], [[7a7m]], [[7a7o]], [[7a7p]], [[7a7q]], [[7a7r]], [[7a7v]], [[7a7w]], [[7a7y]], [[7a7z]], [[7a80]], [[7a81]], [[7a82]], [[7a83]], [[7a84]], [[7a85]], [[7a86]], [[7a87]], [[7a88]], [[7a89]], [[7a8a]], [[7a8b]], [[7a8c]], [[7a8d]], [[7a8e]], [[7a8f]], [[7a8g]], [[7a8i]], [[7a8j]], [[7a8k]], [[7a8l]], [[7a8n]], [[7a8o]], [[7amb]], [[7amf]], [[7amu]], [[7o7c]], [[7o7d]], [[7o7e]], [[7o7h]], [[7o7u]], [[7o7v]], [[7o7w]], [[7o7x]] – jGFP (mutant)<br />
-** [[3evp]], [[5f9g]], [[4zf5]], [[4zf4]], [[4zf3]], [[6ofk]], [[6ofl]], [[6ofm]], [[6ofn]] – jGFP circular permutation<br />
+**[[6mdr]] – jGFP (mutant) – Cryo EM<br />
+**[[3evp]], [[5f9g]], [[4zf5]], [[4zf4]], [[4zf3]], [[6ofk]], [[6ofl]], [[6ofm]], [[6ofn]], [[6ofo]], [[6og8]], [[6og9]], [[6oga]], [[6ogb]], [[6ogc]], [[6un6]], [[6un7]] – jGFP circular permutation<br />
 **[[5du0]], [[5dty]], [[4xov]], [[6h01]] – jGFP non-fluorescent<br />
-** [[2h6v]], [[5j3n]] – jGFP+imidazole derivative<br />
+**[[1rm9]], [[1rmm]], [[1rmo]], [[1rmp]], [[1rrz]] – jGFP containing fluorotryptophan<br />
-** [[1rm9]], [[1rmm]], [[1rmo]], [[1rmp]], [[1rrz]] – jGFP containing fluorotryptophan<br />
+**[[6sm0]] - jGFP containing azidoPhe<br />
-** [[2o24]], [[2o29]], [[2o2b]], [[1w7u]], [[1w7t]], [[1w7s]], [[1emg]] – jGFP (mutant)+imidazole derivative<br />
+**[[2h6v]], [[5j3n]] – jGFP+imidazole derivative<br />
+**[[2o24]], [[2o29]], [[2o2b]], [[1w7u]], [[1w7t]], [[1w7s]], [[1emg]] – jGFP (mutant)+imidazole derivative<br />
 ** [[1kyr]] – jGFP (mutant)+imidazole derivative+Cu<br />
-** [[4gf6]] - jGFP (mutant) +Cu<br />
 ** [[1kys]] – jGFP (mutant)+imidazole derivative+Zn<br />
 ** [[3ss0]], [[3ssh]], [[3ssk]], [[3ssl]], [[3sst]], [[3ssv]], [[3ssy]], [[3sv5]], [[3svb]], [[3svc]], [[3svd]], [[3sve]] – jGFP (mutant)+imidazole derivative+ halide<br />
-** [[3ogo]] – jGFP+cGFP nanobody – camel<br />
+** [[4gf6]] - jGFP (mutant) +Cu<br />
-** [[3g9a]], [[3k1k]] – jGFP+minimize nanobody – ''Lama pacos''<br />
+** [[3ogo]], [[3g9a]], [[3k1k]], [[6lr7]], [[6lz2]], [[6xzf]], [[7cz0]], [[7e53]], [[7sah]], [[7sai]] – jGFP + nanobody <br />
 **[[4xvp]], [[4xl5]] – jGFP (mutant) + BGFP<br />
 **[[5mfc]] – jGFP + armadillo repeat protein<br />
@@ Line 25: / Line 27: @@
 **[[5ma5]] – jGFP + K11<br />
 **[[5mad]] – jGFP + 3G61<br />
+**[[6mwq]] – jGFP + darpin – Cryo EM<br />
 **[[5ma8]], [[5ma6]] – jGFP + 3G124NC<br />
 **[[5lem]], [[5lel]] – jGFP + MBP + 3G124<br />
+**[[5wts]] – jGFP + MDM2<br />
 ** [[2qle]] – GFP (mutant) – ''Azotobacter vinelandii''<br />
 ** [[2rh7]] – GFP – ''Renilla reniformis''<br />
 ** [[3adf]] – monomeric azami green – ''Galaxea fascicularis''<br />
-** [[2vzx]], [[5exb]] – DeGFP – Dendronephthya<br />
+** [[2vzx]], [[5exb]], [[7dig]] – DeGFP – Dendronephthya<br />
 ** [[2gw3]] – GFP KAEDE – ''Trachiphyllia geoffroyi''<br />
-** [[2pox]], [[2gx0]], [[2gx2]], [[2iov]], [[2ie2]] – FP DRONPA – Echinophyllia<br />
+** [[2pox]], [[2gx0]], [[2gx2]], [[2iov]], [[2ie2]] – EchFP Dronpa2 – Echinophyllia<br />
+** [[6d38]], [[6d39]], [[6nqj]], [[6nqk]], [[6nql]], [[6nqq]], [[6nqr]], [[6nqs]], [[6nqv]] - EchFP Dronpa2 (mutant) <br />
 ** [[2dd7]] – CpGFP - ''Chiridius poppei''<br />
 ** [[2dd9]] – CpGFP (mutant)<br />
@@ Line 44: / Line 49: @@
 ** [[4dkm]], [[4dkn]] – GFP – Florida lancelet<br />
 ** [[4hvf]] – clGFP N terminal (mutant) – common lancelet<br />
-** [[4dxi]], [[4dxm]], [[5aqb]] – GFP – synthetic<br />
+** [[4dxi]], [[4dxm]], [[4tza]], [[5aqb]] – GFP – synthetic<br />
-**[[5y01]], [[5y00]] – GFP – ''Olindia formosa''<br />
+** [[5y01]], [[5y00]], [[6j1a]], [[6jxf]] – OfGFP – ''Olindia formosa''<br />
-**[[4jc2]] – GFP – soft coral<br />
+** [[6j1b]], [[6j1c]] – OfRFP (mutant) <br />
+** [[4jc2]] – GFP – soft coral<br />
+** [[6l26]] – GFP – ''Nicotiana benthamiana''<br />
+** [[7lg4]] – GFP – ''Aequorea macrodactyla''<br />
+**[[6s67]] – GFP – ''Aequorea australis''<br />
+**[[6m9x]], [[6m9y]], [[6m9z]] – GFP – ''Branchiostoma floridae''<br />
+**[[4i3b]] – JeGFP – Japanese eel<br />
+**[[4i3d]] – JeGFP (mutant)<br />
 * Yellow fluorescent protein
@@ Line 59: / Line 71: @@
 *Yellow-green fluorescent protein
-**[[5ltr]] – clRFP<br />
+**[[5ltp]], [[5ltr]] – clRFP<br />
-* Red fluorescent protein
+* Red fluorescent protein or mCherry
 ** [[2icr]], [[2ojk]] –  Z-RFP <br />
 ** [[2fl1]] – Z-RFP (mutant)<br />
-** [[3bx9]], [[3bxa]], [[3bxb]], [[3bxc]], [[3e5t]], [[3e5w]], [[1uis]], [[3ip2]], [[3pj5]], [[3pj7]], [[3pjb]], [[3pib]] -  EnRFP  – ''Entacmaea quadricolor''<br />
+** [[3bx9]], [[3bxa]], [[3bxb]], [[3bxc]], [[3e5t]], [[3e5w]], [[1uis]], [[3ip2]], [[3pj5]], [[3pj7]], [[3pjb]], [[3pib]], [[6xwy]] -  EnRFP  – ''Entacmaea quadricolor''<br />
-** [[3e5v]], [[3rwt]] – EnRFP (mutant)<br />
+** [[3e5v]], [[3rwa]], [[3rwt]] – EnRFP (mutant)<br />
-** [[1zgo]], [[2vad]], [[2vae]], [[1ggx]] – DiRFP – ''Discosoma''<br />
+** [[1zgo]], [[2h5o]], [[2h5p]], [[2h5q]], [[2h5r]], [[2vad]], [[2vae]], [[1ggx]], [[3ned]], [[3nez]], [[3nf0]], [[4zin]], [[4zio]], [[5fhv]], [[6ylm]] – DiRFP – ''Discosoma''<br />
-** [[1zgp]], [[1zgq]], [[2h8q]], [[2v4e]], [[1g7k]] – DiRFP (mutant)<br />
+** [[1zgp]], [[1zgq]], [[2h8q]], [[2v4e]], [[1g7k]], [[6mz3]] – DiRFP (mutant)<br />
+**[[6b0b]], [[6bbo]] – DiRFP + APOBEC3H + RNA<br />
+**[[6wqk]] – DiRFP/hnRNPA2 – Cryo EM<br />
+**[[6v00]], [[6v01]] – DiRFP/KCNQ3 + KCNQ1 + Cam-1 – Cryo EM<br />
 ** [[3cfa]] – AsRFP – ''Anemonia sulcata''<br />
 ** [[3nt3]], [[3nt9]] – RFP – artificial gene<br />
@@ Line 76: / Line 91: @@
 ** [[3u8a]], [[3u8c]], [[4kge]], [[4kgf]], [[4gob]] – GFP - synthetic<br />
 **[[5exc]] – DeGFP<br />
+**[[6ir1]], [[6ir2]] – GFP + nanobody – ''Anaplasma marginale''<br />
 * Cyan fluorescent protein
@@ Line 86: / Line 102: @@
 ** [[2zo6]], [[2zo7]] – cyan FP – ''Fungia concinna''<br />
 ** [[1oxd]], [[1oxe]], [[1oxf]] – cyan FP (mutant) – marker plasmid<br />
+**[[7z7o]], [[7z7p]] – GFP – amphioxus<br />
+**[[7z7q]] – GFP – ''Branchiostoma lancelatum''<br />
 * Blue fluorescent protein
@@ Line 91: / Line 109: @@
 ** [[1bfp]], [[4orn]] – jGFP (mutant)<br />
 ** [[4en1]] – jGFP <br />
+**[[6jc5]], [[6jc6]] – GFP – ''Stichodactyla haddoni''<br />
+**[[6j7h]] – GFP – uncultured<br />
 * Cerulean fluorescent protein
-**[[5oxc]] – GFP (mutant) – vaccinia virus<br />
+**[[5oxc]], [[6yln]] – GFP (mutant) – vaccinia virus<br />
 **[[5oxb]], [[5oxa]] – jGFP (mutant)<br />
@@ Line 103: / Line 123: @@
 *Superfolder green fluorescent protein
-**[[5b61]], [[5z6y]] – jGFP<br />
+**[[5b61]], [[5z6y]], [[6oa8]], [[7km4]], [[7pca]], [[7pcz]], [[7pd0]], [[7ugt]] – jGFP<br />
-**[[2b3p]], [[2b3q]], [[2q6p]], [[4lqt]], [[4lqu]], [[4w6b]], [[6b9c]], [[6dq0]] – jGFP (mutant)<br />
+**[[2b3p]], [[2b3q]], [[2q6p]], [[4lqt]], [[4lqu]], [[4w6b]], [[6b9c]], [[6dq0]], [[7ugs]], [[8dpd]] – jGFP (mutant)<br />
 **[[5dy6]] – jGFP + peptide derived chromophore + triazole derivative<br />
+**[[6nhv]] – jGFP + darpin<br />
 *Superfolder yellow fluorescent protein
+**[[7ugr]] – jGFP <br />
 **[[3ed8]] – jGFP (mutant)<br />
@@ Line 114: / Line 136: @@
 ** [[2vvh]], [[2vvi]], [[2vvj]], [[3p8u]] –  LhGFP (mutant) – ''Lobophyllia hemprichii''<br />
-** [[1zux]] –  LhGFP<br />
+** [[1zux]], [[6goz]], [[6gp0]], [[6gp1]], [[6yls]]  –  LhGFP<br />
 ** [[2btj]] -  LhGFP+imidazole derivative<br />
 ** [[2ddc]], [[1xss]] –  FfFP – ''Favia favus''<br />
@@ Line 124: / Line 146: @@
 ** [[3ai4]] – jGFP/mPolymerase iota ubiquitin binding motif - mouse<br />
 ** [[3ai5]], [[3vht]] - jGFP/m ubiquitin<br />
+**[[4i2y]], [[6hr1]] - jGFP/myosin light chain<br />
 ** [[3o77]], [[3o78]], [[3ek4]], [[3ek7]] - jGFP/myosin light chain kinase/calmodulin<br />
 ** [[4anj]] - jGFP/myosin light chain kinase + calmodulin<br />
@@ Line 138: / Line 161: @@
 **[[5fgu]] – jGFP/streptodornase D<br />
 **[[4xgy]] – jGFP/antibody<br />
+**[[7bwn]] – jGFP (mutant)/p53<br />
 **[[6efr]] – jGFP/nicotine biosensor<br />
+**[[6gel]], [[6gez]] – jGFP/calcium sensor<br />
+**[[6zui]] – jGFP/transcriptional repressor<br />
+**[[7cd7]], [[7cd8]] – jGFP/GFP-40<br />
+**[[6wvg]] – jGFP/CD53<br />
+**[[6wrf]], [[6wsg]] – jGFP/ClpX-ClpP<br />
+**[[6w1z]], [[6w20]], [[6w21]], [[6w22]], [[6w23]], [[6w24]] – jGFP/ClpA – Cryo EM<br />
+**[[6lnp]] – jGFP/CitA<br />
+**[[6wve]] – jGFP/SPCS1<br />
+**[[6wvf]] – jGFP/DsbB<br />
+**[[6wvd]] – jGFP/JAGN1<br />
+**[[6zqo]] – jGFP/G protein<br />
+**[[7ks0]], [[7ks3]] – jGFP/GluK5 + GluK2 – Cryo EM<br />
+**[[6wv9]], [[6wva]], [[6wvi]] – jGFP/VKOR<br />
+**[[6wv5]], [[6wv8]] – jGFP/VKOR (mutant) + vitamin K1<br />
+**[[6wv3]], [[6wv6]], [[6wv7]], [[6wvb]], [[6wvh]] – jGFP/VKOR + anticoagulant<br />
+**[[6wv4]] – jGFP/VKOR (mutant) + anticoagulant<br />
 **[[6mks]] – jGFP/NLRcard – Cryo EM<br />
 **[[6mb2]] – jGFP/AIM2 – Cryo EM<br />
 **[[6itc]] – jGFP/translocase + nanobody – Cryo EM<br />
+**[[6uz3]], [[7xmf]], [[7xmg]] – jGFP/sodium channel – Cryo EM<br />
+**[[7k18]] – jGFP/sodium channel + toxin – Cryo EM<br />
+**[[6uz0]], [[8f6p]] – jGFP/sodium channel + drug – Cryo EM<br />
+**[[7ssx]], [[7ssy]] – jGFP/potassium channel – Cryo EM<br />
+**[[7ssv]] – jGFP/potassium channel + antibody – Cryo EM<br />
+**[[7ssz]], [[8dfl]] – jGFP/potassium channel + nanobody – Cryo EM<br />
+**[[7sjd]], [[7zji]] – jGFP/receptor potential cation channel – Cryo EM<br />
+**[[6val]], [[6vam]] – jGFP/Calhm – Cryo EM<br />
+**[[7byl]] – jGFP/KCNQ4 – Cryo EM<br />
+**[[7bym]], [[7byn]] – jGFP/KCNQ4 + drug – Cryo EM<br />
+**[[5bkf]], [[7l31]] – jGFP/glycine receptor – Cryo EM<br />
+**[[7eeb]] – jGFP/catspermasome – Cryo EM<br />
+**[[6yov]] – jGFP/nucleosome – Cryo EM<br />
+**[[7sx3]], [[7sx4]] – jGFP/channelosome – Cryo EM<br />
+**[[7rfp]] – jGFP/TNFR + antibody – Cryo EM<br />
+**[[4z4k]] – jGFP/TAX1-binding protein – Cryo EM<br />
+**[[4z4m]] – jGFP/TAX1-binding protein <br />
+**[[7vcm]] – jGFP/potassium-binding protein <br />
+**[[8et3]] – jGFP in delivery complex – Cryo EM<br />
 }}
 [[Category:Topic Page]]

Green Fluorescent Protein 3D structures

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3D structures of Green Fluorescent Protein

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