This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4y61

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='4y61' size='340' side='right'caption='[[4y61]], [[Resolution|resolution]] 3.36&Aring;' scene=''>
<StructureSection load='4y61' size='340' side='right'caption='[[4y61]], [[Resolution|resolution]] 3.36&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4y61]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y61 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Y61 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4y61]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Y61 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Y61 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Ptprd ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice]), Slitrk2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4y61 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y61 OCA], [https://pdbe.org/4y61 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4y61 RCSB], [https://www.ebi.ac.uk/pdbsum/4y61 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4y61 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein-tyrosine-phosphatase Protein-tyrosine-phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.48 3.1.3.48] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4y61 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4y61 OCA], [http://pdbe.org/4y61 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4y61 RCSB], [http://www.ebi.ac.uk/pdbsum/4y61 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4y61 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/SLIK2_MOUSE SLIK2_MOUSE]] Suppresses neurite outgrowth.<ref>PMID:14550773</ref>
+
[https://www.uniprot.org/uniprot/PTPRD_MOUSE PTPRD_MOUSE]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 20:
==See Also==
==See Also==
-
*[[Tyrosine phosphatase|Tyrosine phosphatase]]
+
*[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 28: Line 26:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Mus musculus]]
-
[[Category: Protein-tyrosine-phosphatase]]
+
[[Category: Fukai S]]
-
[[Category: Fukai, S]]
+
[[Category: Goto-Ito S]]
-
[[Category: Goto-Ito, S]]
+
[[Category: Maeda A]]
-
[[Category: Maeda, A]]
+
[[Category: Sato Y]]
-
[[Category: Sato, Y]]
+
[[Category: Shiroshima T]]
-
[[Category: Shiroshima, T]]
+
[[Category: Uemura T]]
-
[[Category: Uemura, T]]
+
[[Category: Yamgata A]]
-
[[Category: Yamgata, A]]
+
[[Category: Yoshida T]]
-
[[Category: Yoshida, T]]
+
-
[[Category: Hydrolase-signaling protein complex]]
+
-
[[Category: Trans-synaptic complex]]
+

Revision as of 07:59, 3 May 2023

Crystal structure of the complex between Slitrk2 LRR1 and PTP delta Ig1-Fn1

PDB ID 4y61

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4y61"
Personal tools