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User:Jaime Prilusky/Test/saveScene

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< User:Jaime Prilusky(Difference between revisions)
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Current revision (16:08, 6 May 2023) (edit) (undo)
 
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<StructureSection load='' size='340' side='right' caption='' scene='91/918478/1pov/2'>
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<StructureSection load='' size='340' side='right' caption='' >
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This is the result of dropping the file 1pov-nohet-distance.spt on SAT's Jmol applet, then running on Jmol Console ''set defaultLoadFilter "*.CA;biomolecule 1;bmchains;/=2"'', and saving the scene.
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<scene name='91/918478/Structure/4'>caption</scene>
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Zoom on <scene name='91/918478/1ejg/1'>residue 33</scene>
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<!-- scene='91/918478/1pov_nohet/4'> -->
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*This is the result of dropping the file 1pov-nohet-distance.spt on SAT's Jmol applet, adding slab, and saving the scene.
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*Example from uploaded file to Proteopedia: <scene name='91/918478/3iyv/1'>3iyv-half-heavyonly-rainbow.spt</scene>. Executed '''cpk on''' (thank you Angel), before saving scene, to display atoms.
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* Load molecule <scene name='91/918478/3iyv/2'>3iyv</scene> FILTER *.CA;biomolecule 1;bmchains;/=2; spacefill 120%
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<scene name='91/918478/1stp/2'>test 1stp</scene>
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inserted the page id of other pages as &lt;!-- /471747/ /351028/ --> to enable editing scenes from those pages
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<!--
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/471747/ /963801/
This almost works. Jmol state has two places with 'set defaultLoadFilter': one inside function _setFileState, where it is set to empty, and another in function _setParameterState, where it gets the value we assign from SAT's console. Problem is that when loading a scene, Jmol executes _setFileState (loads the file with an empty loadFilter) and then _setParameterState, where the defaultLoadFilter has no effect.
This almost works. Jmol state has two places with 'set defaultLoadFilter': one inside function _setFileState, where it is set to empty, and another in function _setParameterState, where it gets the value we assign from SAT's console. Problem is that when loading a scene, Jmol executes _setFileState (loads the file with an empty loadFilter) and then _setParameterState, where the defaultLoadFilter has no effect.
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For theis scene I modified by hand the script, server side, setting the desired value to 'set defaultLoadFilter' inside function _setFileState
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I was unable to find a suitable Jmol.getPropertyAsArray() to get the value of the FILTER applied when loading the model. This can help on cases when dropping a spt file like 1pov-nohet-distance.spt
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For this scene I modified by hand the script, server side, setting the desired value to 'set defaultLoadFilter' inside function _setFileState
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-->
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<!--
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'''Newer option:''' <scene name='91/918478/1pov/3'>1pov wobble</scene>, made by dropping 1pov-nohet-distance.spt on SAT's Jmol applet and setting FILTER before saving. Then, value of FILTER is conserved.
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-->
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<!-- set <scene name='91/918478/1pov/2'>set defaultLoadFilter</scene> "*.CA;biomolecule 1;bmchains;/=2" -->
<!-- set <scene name='91/918478/1pov/2'>set defaultLoadFilter</scene> "*.CA;biomolecule 1;bmchains;/=2" -->

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References

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Jaime Prilusky

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