|
|
| Line 3: |
Line 3: |
| | <StructureSection load='4zhs' size='340' side='right'caption='[[4zhs]], [[Resolution|resolution]] 2.60Å' scene=''> | | <StructureSection load='4zhs' size='340' side='right'caption='[[4zhs]], [[Resolution|resolution]] 2.60Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4zhs]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichophyton_rubrum_bmu01672 Trichophyton rubrum bmu01672]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZHS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZHS FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4zhs]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichophyton_rubrum_BMU01672 Trichophyton rubrum BMU01672]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZHS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZHS FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zhs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zhs OCA], [https://pdbe.org/4zhs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zhs RCSB], [https://www.ebi.ac.uk/pdbsum/4zhs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zhs ProSAT]</span></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4zic|4zic]]</td></tr>
| + | |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aspartate-semialdehyde_dehydrogenase Aspartate-semialdehyde dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.11 1.2.1.11] </span></td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zhs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zhs OCA], [http://pdbe.org/4zhs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zhs RCSB], [http://www.ebi.ac.uk/pdbsum/4zhs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zhs ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/A0A140UHG6_TRIRU A0A140UHG6_TRIRU] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
| Line 22: |
Line 21: |
| | ==See Also== | | ==See Also== |
| | *[[Aspartate-semialdehyde dehydrogenase 3D structures|Aspartate-semialdehyde dehydrogenase 3D structures]] | | *[[Aspartate-semialdehyde dehydrogenase 3D structures|Aspartate-semialdehyde dehydrogenase 3D structures]] |
| - | *[[Retinoid X receptor|Retinoid X receptor]] | + | *[[Retinoid X receptor 3D structures|Retinoid X receptor 3D structures]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Aspartate-semialdehyde dehydrogenase]] | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Trichophyton rubrum bmu01672]] | + | [[Category: Trichophyton rubrum BMU01672]] |
| - | [[Category: Cui, S]] | + | [[Category: Cui S]] |
| - | [[Category: Li, Q]] | + | [[Category: Li Q]] |
| - | [[Category: Oxidoreductase]]
| + | |
| - | [[Category: Tetramer]]
| + | |
| - | [[Category: Trichophyton rubrum]]
| + | |
| Structural highlights
Function
A0A140UHG6_TRIRU
Publication Abstract from PubMed
Aspartate-beta-semialdehyde dehydrogenase (ASADH) catalyzes the second reaction in the aspartate pathway, a pathway required for the biosynthesis of one fifth of the essential amino acids in plants and microorganisms. Microarray analysis of a fungal pathogen T. rubrum responsible for most human dermatophytoses identified the upregulation of ASADH (trASADH) expression when the fungus is exposed to human skin, underscoring its potential as a drug target. Here we report the crystal structure of trASADH, revealing a tetrameric ASADH with a GAPDH-like fold. The tetramerization of trASADH was confirmed by sedimentation and SAXS experiments. Native PAGE demonstrated that this ASADH tetramerization is apparently universal in fungal species, unlike the functional dimer that is observed in all bacterial ASADHs. The helical subdomain in dimeric bacteria ASADH is replaced by the cover loop in archaeal/fungal ASADHs, presenting the determinant for this altered oligomerization. Mutations that disrupt the tetramerization of trASADH also abolish the catalytic activity, suggesting that the tetrameric state is required to produce the active fungal enzyme form. Our findings provide a basis to categorize ASADHs into dimeric and tetrameric enzymes, adopting a different orientation for NADP binding and offer a structural framework for designing drugs that can specifically target the fungal pathogens.
Structural Insights into the Tetrameric State of Aspartate-beta-semialdehyde Dehydrogenases from Fungal Species.,Li Q, Mu Z, Zhao R, Dahal G, Viola RE, Liu T, Jin Q, Cui S Sci Rep. 2016 Feb 12;6:21067. doi: 10.1038/srep21067. PMID:26869335[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Li Q, Mu Z, Zhao R, Dahal G, Viola RE, Liu T, Jin Q, Cui S. Structural Insights into the Tetrameric State of Aspartate-beta-semialdehyde Dehydrogenases from Fungal Species. Sci Rep. 2016 Feb 12;6:21067. doi: 10.1038/srep21067. PMID:26869335 doi:http://dx.doi.org/10.1038/srep21067
|
