4zpy
From Proteopedia
(Difference between revisions)
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<StructureSection load='4zpy' size='340' side='right'caption='[[4zpy]], [[Resolution|resolution]] 3.80Å' scene=''> | <StructureSection load='4zpy' size='340' side='right'caption='[[4zpy]], [[Resolution|resolution]] 3.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4zpy]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZPY OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[4zpy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Murine_minute_virus_strain_MVM_prototype Murine minute virus strain MVM prototype]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZPY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZPY FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zpy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zpy OCA], [https://pdbe.org/4zpy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zpy RCSB], [https://www.ebi.ac.uk/pdbsum/4zpy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zpy ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/CAPSD_MUMIP CAPSD_MUMIP] Capsid protein self-assembles to form an icosahedral capsid with a T=1 symmetry, about 22 nm in diameter, and consisting of 60 copies of two size variants of the capsid proteins, VP1 and VP2, which differ by the presence of an N-terminal extension in the minor protein VP1. The capsid encapsulates the genomic ssDNA. Capsid proteins are responsible for the attachment to host cell receptors. This attachment induces virion internalization predominantly through clathrin-dependent endocytosis. Binding to the host receptors also induces capsid rearrangements leading to surface exposure of VP1 N-terminus, specifically its phospholipase A2-like region and putative nuclear localization signal(s). VP1 N-terminus might serve as a lipolytic enzyme to breach the endosomal membrane during entry into host cell and might contribute to virus transport to the nucleus.<ref>PMID:16284249</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 4zpy" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 4zpy" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Guerra | + | [[Category: Murine minute virus strain MVM prototype]] |
- | [[Category: Mateu | + | [[Category: Guerra P]] |
- | [[Category: Querol-Audi | + | [[Category: Mateu MG]] |
- | [[Category: Silva | + | [[Category: Querol-Audi J]] |
- | [[Category: Verdaguer | + | [[Category: Silva C]] |
- | + | [[Category: Verdaguer N]] | |
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Revision as of 07:37, 18 May 2023
Structure of N170A MVM mutant empty capsid
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