4zv5

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'''Unreleased structure'''
 
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The entry 4zv5 is ON HOLD until Paper Publication
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==Crystal structure of N-myristoylated mouse mammary tumor virus matrix protein==
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<StructureSection load='4zv5' size='340' side='right'caption='[[4zv5]], [[Resolution|resolution]] 1.57&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4zv5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mouse_mammary_tumor_virus_(STRAIN_BR6) Mouse mammary tumor virus (STRAIN BR6)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZV5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zv5 OCA], [https://pdbe.org/4zv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zv5 RCSB], [https://www.ebi.ac.uk/pdbsum/4zv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zv5 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/GAG_MMTVC GAG_MMTVC] p10 is the matrix protein. P14 is the nucleocapsid protein. Binds to single stranded DNA. p27 is the capsid protein.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: Myristoylation of the matrix (MA) domain mediates the transport and binding of Gag polyproteins to the plasma membrane (PM) and is required for the assembly of most retroviruses. In betaretroviruses, which assemble immature particles in the cytoplasm, myristoylation is dispensable for assembly but is crucial for particle transport to the PM. Oligomerization of HIV-1 MA stimulates the transition of the myristoyl group from a sequestered to an exposed conformation, which is more accessible for membrane binding. However, for other retroviruses, the effect of MA oligomerization on myristoyl group exposure has not been thoroughly investigated. RESULTS: Here, we demonstrate that MA from the betaretrovirus mouse mammary tumor virus (MMTV) forms dimers in solution and that this process is stimulated by its myristoylation. The crystal structure of N-myristoylated MMTV MA, determined at 1.57 A resolution, revealed that the myristoyl groups are buried in a hydrophobic pocket at the dimer interface and contribute to dimer formation. Interestingly, the myristoyl groups in the dimer are mutually swapped to achieve energetically stable binding, as documented by molecular dynamics modeling. Mutations within the myristoyl binding site resulted in reduced MA dimerization and extracellular particle release. CONCLUSIONS: Based on our experimental, structural, and computational data, we propose a model for dimerization of MMTV MA in which myristoyl groups stimulate the interaction between MA molecules. Moreover, dimer-forming MA molecules adopt a sequestered conformation with their myristoyl groups entirely buried within the interaction interface. Although this differs from the current model proposed for lentiviruses, in which oligomerization of MA triggers exposure of myristoyl group, it appears convenient for intracellular assembly, which involves no apparent membrane interaction and allows the myristoyl group to be sequestered during oligomerization.
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Authors: Zabransky, A., Dolezal, M., Dostal, J., Vanek, O., Hadravova, R., Stokrova, J., Brynda, J., Pichova, I.
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Myristoylation drives dimerization of matrix protein from mouse mammary tumor virus.,Dolezal M, Zabransky A, Dostal J, Vanek O, Brynda J, Lepsik M, Hadravova R, Pichova I Retrovirology. 2016 Jan 5;13(1):2. doi: 10.1186/s12977-015-0235-8. PMID:26728401<ref>PMID:26728401</ref>
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Description: Crystal structure of N-myristoylated mouse mammary tumor virus matrix protein
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Pichova, I]]
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<div class="pdbe-citations 4zv5" style="background-color:#fffaf0;"></div>
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[[Category: Zabransky, A]]
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== References ==
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[[Category: Dolezal, M]]
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<references/>
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[[Category: Brynda, J]]
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__TOC__
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[[Category: Hadravova, R]]
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</StructureSection>
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[[Category: Dostal, J]]
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[[Category: Large Structures]]
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[[Category: Vanek, O]]
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[[Category: Brynda J]]
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[[Category: Stokrova, J]]
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[[Category: Dolezal M]]
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[[Category: Dostal J]]
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[[Category: Hadravova R]]
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[[Category: Pichova I]]
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[[Category: Stokrova J]]
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[[Category: Vanek O]]
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[[Category: Zabransky A]]

Current revision

Crystal structure of N-myristoylated mouse mammary tumor virus matrix protein

PDB ID 4zv5

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