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Histone 3D structures
From Proteopedia
(Difference between revisions)
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**[[1hst]] – cH5<br /> | **[[1hst]] – cH5<br /> | ||
**[[2xql]], [[3c9k]] - cH3.2 + H4 + H2A + H2B – Cryo EM<br /> | **[[2xql]], [[3c9k]] - cH3.2 + H4 + H2A + H2B – Cryo EM<br /> | ||
| - | **[[6k01]], [[6w4l]] - XlH2A/H2B - Xenopus laevis <br /> | + | **[[6k01]], [[6w4l]] - XlH2A/H2B - ''Xenopus laevis'' <br /> |
| - | **[[6k03]] - CeH2A + H2B – Caenorhabditis elegans<br /> | + | **[[7pj1]] – DmH2A + H2B – ''Drosophila melanogaster'' - NMR<br /> |
| + | **[[6k03]] - CeH2A + H2B – ''Caenorhabditis elegans''<br /> | ||
**[[1yqa]] – yH1 (mutant) – yeast – NMR<br /> | **[[1yqa]] – yH1 (mutant) – yeast – NMR<br /> | ||
**[[1uss]], [[1ust]], [[1uhm]] – yH1 globular domain – NMR<br /> | **[[1uss]], [[1ust]], [[1uhm]] – yH1 globular domain – NMR<br /> | ||
| - | **[[1ku5]] – HPHA – Pyrococcus horikoshii<br /> | + | **[[1ku5]] – HPHA – ''Pyrococcus horikoshii''<br /> |
| - | **[[1b67]], [[1b6w]], [[1a7w]], [[1hta]] – MfHMFA – Methanococcus fervidus<br /> | + | **[[1b67]], [[1b6w]], [[1a7w]], [[1hta]] – MfHMFA – ''Methanococcus fervidus''<br /> |
**[[1bfm]] – MfHB - NMR<br /> | **[[1bfm]] – MfHB - NMR<br /> | ||
| - | **[[1f1e]] – H – Methanopyrus kandleri<br /> | + | **[[1f1e]] – H – ''Methanopyrus kandleri''<br /> |
*Histones complex with protein | *Histones complex with protein | ||
| Line 34: | Line 35: | ||
**[[6miq]], [[6mio]], [[6min]] – hH3 + TFIID<br /> | **[[6miq]], [[6mio]], [[6min]] – hH3 + TFIID<br /> | ||
**[[6mim]], [[6mil]] – hH3 + AF9<br /> | **[[6mim]], [[6mil]] – hH3 + AF9<br /> | ||
| + | **[[7v6q]] – hH3.1 + H4 + NASP + ASF1A<br /> | ||
| + | **[[7vcl]] – hH2A + H2B + BKRF4<br /> | ||
| + | **[[8i17]] – hH2A + H2B + SPT16<br /> | ||
| + | **[[7qxb]], [[7trf]] – hH2A + H2B + telomerase reverse transcriptase + RNA – Cryo EM<br /> | ||
| + | **[[7qxa]] – hH2A + H2B + telomerase reverse transcriptase + adrenocortical dysplasia protein + RNA – Cryo EM<br /> | ||
| + | **[[8h0v]], [[8h0w]] – hH2A + H2B + H4 + H1.2 in RNA polymerase complex – Cryo EM<br /> | ||
**[[5ja4]], [[5bnv]] – hH3.3 + H4 + TONSL + MCM2<br /> | **[[5ja4]], [[5bnv]] – hH3.3 + H4 + TONSL + MCM2<br /> | ||
| + | **[[7cj0]] – hH3.3 + H4 + HDJC9 + MCM2<br /> | ||
**[[5bo0]], [[5bnx]] – hH3.2 + H4 + ASF1B + MCM2<br /> | **[[5bo0]], [[5bnx]] – hH3.2 + H4 + ASF1B + MCM2<br /> | ||
| + | **[[7vcq]] – hH3.3 + H4 + ASF1B + BKRF4<br /> | ||
**[[6mlc]] - hH4 + histone-lysine methyltransferase <br /> | **[[6mlc]] - hH4 + histone-lysine methyltransferase <br /> | ||
**[[6qxz]] – hH3.3 + histone-lysine methyltransferase - NMR<br /> | **[[6qxz]] – hH3.3 + histone-lysine methyltransferase - NMR<br /> | ||
| Line 50: | Line 59: | ||
**[[5bsa]], [[5bs7]] – XlH3.2 + H4 + SPT2<br /> | **[[5bsa]], [[5bs7]] – XlH3.2 + H4 + SPT2<br /> | ||
**[[6o22]] - XlH3.2 + H4 + RTT109 + ASF1<br /> | **[[6o22]] - XlH3.2 + H4 + RTT109 + ASF1<br /> | ||
| - | **[[4eo5]] - XlH3.2 (mutant) + H4 (mutant) + | + | **[[7unk]] - XlH3 + H4 + importin-4 + ASF1<br /> |
| + | **[[4eo5]] - XlH3.2 (mutant) + H4 (mutant) + ASF1<br /> | ||
**[[4ld9]] - XlH3.2 + H4 + H2A + H2B + widom sequence reverse + SIR3<br /> | **[[4ld9]] - XlH3.2 + H4 + H2A + H2B + widom sequence reverse + SIR3<br /> | ||
**[[6k09]], [[6k0c]] - CeH2A + H2B + NAP1<br /> | **[[6k09]], [[6k0c]] - CeH2A + H2B + NAP1<br /> | ||
| Line 59: | Line 69: | ||
**[[4wnn]] – yH32A + H2B + SPT2<br /> | **[[4wnn]] – yH32A + H2B + SPT2<br /> | ||
**[[2hue]] - yH3 + H4 + anti-silencing protein<br /> | **[[2hue]] - yH3 + H4 + anti-silencing protein<br /> | ||
| - | **[[4uuz]] – DmH3 + H4 + DNA replication licensing factor | + | **[[7xay]] - yH3 + H4 + cytochrome b562 + ASF1<br /> |
| + | **[[4uuz]] – DmH3 + H4 + DNA replication licensing factor <br /> | ||
**[[2yfv]], [[2yfw]] - KlH4 + H3-like centromeric protein + SCM3 – ''Kluyveromyces lactis''<br /> | **[[2yfv]], [[2yfw]] - KlH4 + H3-like centromeric protein + SCM3 – ''Kluyveromyces lactis''<br /> | ||
**[[6uph]] - Kl H3-like centromeric protein + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6uph]] - Kl H3-like centromeric protein + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
| Line 68: | Line 79: | ||
**[[3av1]], [[2av2]], [[3av2]], [[3waa]], [[3wa9]], [[3w99]], [[3w98]], [[3w97]], [[3w96]], [[5x7x]], [[3a6n]], [[3afa]], [[2cv5]], [[5jrg]], [[5gxq]], [[5gt3]], [[5gt0]], [[5gsu]], [[5gse]], [[5cpk]], [[5cpj]], [[5cpi]], [[5b33]], [[5b32]], [[5b31]], [[5b2j]], [[5b2i]], [[5b24]], [[5b0z]], [[5b0y]], [[5ay8]], [[5avc]], [[5avb]], [[5av9]], [[5av8]], [[5av6]], [[5av5]], [[5z5t]], [[4ym6]], [[4ym5]], [[5y0c]], [[5onw]], [[5ong]], [[5omx]], [[6hkt]], [[6jou]], [[6jr0]], [[6jr1]], [[6k1i]], [[6k1j]], [[6j1k]], [[6ke9]], [[6l9h]], [[6le9]], [[6ipu]], [[6iq4]], [[6jxd]], [[6kvd]], [[6ler]], [[6m3v]], [[6m44]], [[6v2k]] – hH3.1 + H4 + H2A + H2B in nucleosome<br /> | **[[3av1]], [[2av2]], [[3av2]], [[3waa]], [[3wa9]], [[3w99]], [[3w98]], [[3w97]], [[3w96]], [[5x7x]], [[3a6n]], [[3afa]], [[2cv5]], [[5jrg]], [[5gxq]], [[5gt3]], [[5gt0]], [[5gsu]], [[5gse]], [[5cpk]], [[5cpj]], [[5cpi]], [[5b33]], [[5b32]], [[5b31]], [[5b2j]], [[5b2i]], [[5b24]], [[5b0z]], [[5b0y]], [[5ay8]], [[5avc]], [[5avb]], [[5av9]], [[5av8]], [[5av6]], [[5av5]], [[5z5t]], [[4ym6]], [[4ym5]], [[5y0c]], [[5onw]], [[5ong]], [[5omx]], [[6hkt]], [[6jou]], [[6jr0]], [[6jr1]], [[6k1i]], [[6k1j]], [[6j1k]], [[6ke9]], [[6l9h]], [[6le9]], [[6ipu]], [[6iq4]], [[6jxd]], [[6kvd]], [[6ler]], [[6m3v]], [[6m44]], [[6v2k]] – hH3.1 + H4 + H2A + H2B in nucleosome<br /> | ||
**[[6r0c]], [[6t79]], [[6r94]], [[6r93]], [[6l4a]], [[6t93]], [[7nl0]] – hH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6r0c]], [[6t79]], [[6r94]], [[6r93]], [[6l4a]], [[6t93]], [[7nl0]] – hH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
| + | **[[6l49]], [[6l9z]], [[6m4d]], [[6m4g]], [[6m4h]], [[6r25]], [[7u51]], [[7u52]], [[7u53]], [[7v90]], [[7v9c]], [[7v9j]], [[7v9k]], [[7v9s]], [[7va4]], [[7v96]], [[7xd1]], [[7xzy]], [[7y00]], [[8aag]] - hH3.1 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
**[[5z30]] – hH3.1 + H4 + H2A (mutant) + H2B in nucleosome<br /> | **[[5z30]] – hH3.1 + H4 + H2A (mutant) + H2B in nucleosome<br /> | ||
**[[5y0d]] – hH3.1 + H4 + H2A + H2B (mutant) in nucleosome<br /> | **[[5y0d]] – hH3.1 + H4 + H2A + H2B (mutant) in nucleosome<br /> | ||
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**[[3azi]], [[3azj]], [[3azk]], [[3azl]], [[3azm]], [[3azn]] - hH3.1 + H4 (mutant) + H2A + H2B in nucleosome<br /> | **[[3azi]], [[3azj]], [[3azk]], [[3azl]], [[3azm]], [[3azn]] - hH3.1 + H4 (mutant) + H2A + H2B in nucleosome<br /> | ||
**[[7lya]] - hH3.1 + H4 + H2B in nucleosome – Cryo EM<br /> | **[[7lya]] - hH3.1 + H4 + H2B in nucleosome – Cryo EM<br /> | ||
| - | **[[6l49]], [[6l9z]], [[6m4d]], [[6m4g]], [[6m4h]], [[6r25]] - hH3.1 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
**[[6pwx]] - hH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | **[[6pwx]] - hH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br /> | ||
| + | **[[7pet]], [[7peu]], [[7pev]], [[7pew]], [[7pex]], [[7pey]], [[7pez]], [[7pf0]], [[7pf2]], [[7pf3]], [[7pf4]], [[7pf5]], [[7pf6]], [[7pfa]], [[7pfc]], [[7pfd]], [[7pfe]], [[7pff]], [[7pft]], [[7pfu]], [[7pfv]], [[7pfw]], [[7pfx]] - hH3.2 + H4 + H2A + H2B + H1.4 in nucleosome – Cryo EM<br /> | ||
| + | **[[7x57]], [[7x58]] - hH3.1 + H4 in nucleosome – Cryo EM<br /> | ||
**[[5xf5]], [[5xf4]], [[5xf3]] - hH3.1 + H4 + H2A + H2B in nucleosome + Ru derivative<br /> | **[[5xf5]], [[5xf4]], [[5xf3]] - hH3.1 + H4 + H2A + H2B in nucleosome + Ru derivative<br /> | ||
Revision as of 06:07, 21 May 2023
3D Structures of histone
Updated on 21-May-2023
