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5apa

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Current revision (06:21, 31 May 2023) (edit) (undo)
 
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<StructureSection load='5apa' size='340' side='right'caption='[[5apa]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
<StructureSection load='5apa' size='340' side='right'caption='[[5apa]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5apa]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3rcq 3rcq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5APA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5APA FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5apa]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3rcq 3rcq]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5APA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5APA FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LMR:(2S)-2-HYDROXYBUTANEDIOIC+ACID'>LMR</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=LMR:(2S)-2-HYDROXYBUTANEDIOIC+ACID'>LMR</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide-aspartate_beta-dioxygenase Peptide-aspartate beta-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.11.16 1.14.11.16] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5apa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5apa OCA], [https://pdbe.org/5apa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5apa RCSB], [https://www.ebi.ac.uk/pdbsum/5apa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5apa ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5apa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5apa OCA], [http://pdbe.org/5apa PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5apa RCSB], [http://www.ebi.ac.uk/pdbsum/5apa PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5apa ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/ASPH_HUMAN ASPH_HUMAN]] Isoform 1: specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins.<ref>PMID:22586105</ref> Isoform 8: membrane-bound Ca(2+)-sensing protein, which is a structural component of the ER-plasma membrane junctions. Isoform 8 regulates the activity of Ca(+2) released-activated Ca(+2) (CRAC) channels in T-cells.<ref>PMID:22586105</ref>
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[https://www.uniprot.org/uniprot/ASPH_HUMAN ASPH_HUMAN] Isoform 1: specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins.<ref>PMID:22586105</ref> Isoform 8: membrane-bound Ca(2+)-sensing protein, which is a structural component of the ER-plasma membrane junctions. Isoform 8 regulates the activity of Ca(+2) released-activated Ca(+2) (CRAC) channels in T-cells.<ref>PMID:22586105</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Peptide-aspartate beta-dioxygenase]]
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[[Category: Allerston C]]
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[[Category: Allerston, C]]
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[[Category: Arrowsmith CH]]
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[[Category: Arrowsmith, C H]]
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[[Category: Bountra C]]
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[[Category: Bountra, C]]
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[[Category: Chaikuad A]]
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[[Category: Chaikuad, A]]
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[[Category: Edwards A]]
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[[Category: Delft, F von]]
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[[Category: Gileadi O]]
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[[Category: Edwards, A]]
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[[Category: Hozjan V]]
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[[Category: Gileadi, O]]
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[[Category: Kavanagh K]]
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[[Category: Hozjan, V]]
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[[Category: Kochan G]]
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[[Category: Kavanagh, K]]
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[[Category: Krojer T]]
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[[Category: Kochan, G]]
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[[Category: McDonough MA]]
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[[Category: Krojer, T]]
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[[Category: Muniz JR]]
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[[Category: McDonough, M A]]
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[[Category: Oppermann U]]
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[[Category: Muniz, J R]]
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[[Category: Pfeffer I]]
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[[Category: Oppermann, U]]
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[[Category: Pilka E]]
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[[Category: Pfeffer, I]]
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[[Category: Weigelt J]]
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[[Category: Pilka, E]]
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[[Category: Von Delft F]]
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[[Category: Weigelt, J]]
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[[Category: Oxidoreductase]]
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[[Category: Sgc]]
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[[Category: Structural genomic]]
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Current revision

Crystal structure of human aspartate beta-hydroxylase isoform a

PDB ID 5apa

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