This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5b1k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='5b1k' size='340' side='right'caption='[[5b1k]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
<StructureSection load='5b1k' size='340' side='right'caption='[[5b1k]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5b1k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"achromobacter_xylosoxidans"_yabuuchi_and_ohyama_1971 "achromobacter xylosoxidans" yabuuchi and ohyama 1971]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B1K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5B1K FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5b1k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B1K FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5b1j|5b1j]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b1k OCA], [https://pdbe.org/5b1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b1k RCSB], [https://www.ebi.ac.uk/pdbsum/5b1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b1k ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nir, nirK, ERS451415_02178 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85698 "Achromobacter xylosoxidans" Yabuuchi and Ohyama 1971])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrite_reductase_(NO-forming) Nitrite reductase (NO-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.1 1.7.2.1] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5b1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b1k OCA], [http://pdbe.org/5b1k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5b1k RCSB], [http://www.ebi.ac.uk/pdbsum/5b1k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5b1k ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O68601_ALCXX O68601_ALCXX]
==See Also==
==See Also==
Line 15: Line 14:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Achromobacter xylosoxidans yabuuchi and ohyama 1971]]
+
[[Category: Achromobacter xylosoxidans]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Nojiri, M]]
+
[[Category: Nojiri M]]
-
[[Category: Chloride ion]]
+
-
[[Category: Copper nitrite reductase]]
+
-
[[Category: Oxidoreductase]]
+

Revision as of 06:35, 31 May 2023

Crystal structure of the chloride-bound form of blue copper nitrite reductase

PDB ID 5b1k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools