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5gsf

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(New page: '''Unreleased structure''' The entry 5gsf is ON HOLD Authors: Xiao, T., Tam, J.P. Description: Structure of roseltide rT1 Category: Unreleased Structures Category: Xiao, T [[Ca...)
Current revision (10:09, 14 June 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5gsf is ON HOLD
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==Structure of roseltide rT1==
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<StructureSection load='5gsf' size='340' side='right'caption='[[5gsf]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5gsf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hibiscus_sabdariffa Hibiscus sabdariffa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GSF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GSF FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gsf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gsf OCA], [https://pdbe.org/5gsf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gsf RCSB], [https://www.ebi.ac.uk/pdbsum/5gsf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gsf ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A1S4NYD9_9ROSI A0A1S4NYD9_9ROSI]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Plant knottins are of therapeutic interest due to their high metabolic stability and inhibitory activity against proteinases involved in human diseases. The only knottin-type proteinase inhibitor against porcine pancreatic elastase was first identified from the squash family in 1989. Here, we report the identification and characterization of a knottin-type human neutrophil elastase inhibitor from Hibiscus sabdariffa of the Malvaceae family. Combining proteomic and transcriptomic methods, we identified a panel of novel cysteine-rich peptides, roseltides (rT1-rT8), which range from 27 to 39 residues with six conserved cysteine residues. The 27-residue roseltide rT1 contains a cysteine spacing and amino acid sequence that is different from the squash knottin-type elastase inhibitor. NMR analysis demonstrated that roseltide rT1 adopts a cystine-knot fold. Transcriptome analyses suggested that roseltides are bioprocessed by asparagine endopeptidases from a three-domain precursor. The cystine-knot structure of roseltide rT1 confers its high resistance against degradation by endopeptidases, 0.2 N HCl, and human serum. Roseltide rT1 was shown to inhibit human neutrophil elastase using enzymatic and pull-down assays. Additionally, roseltide rT1 ameliorates neutrophil elastase-stimulated cAMP accumulation in vitro. Taken together, our findings demonstrate that roseltide rT1 is a novel knottin-type neutrophil elastase inhibitor with therapeutic potential for neutrophil elastase associated diseases.
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Authors: Xiao, T., Tam, J.P.
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Identification and Characterization of Roseltide, a Knottin-type Neutrophil Elastase Inhibitor Derived from Hibiscus sabdariffa.,Loo S, Kam A, Xiao T, Nguyen GK, Liu CF, Tam JP Sci Rep. 2016 Dec 19;6:39401. doi: 10.1038/srep39401. PMID:27991569<ref>PMID:27991569</ref>
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Description: Structure of roseltide rT1
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Xiao, T]]
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<div class="pdbe-citations 5gsf" style="background-color:#fffaf0;"></div>
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[[Category: Tam, J.P]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Hibiscus sabdariffa]]
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[[Category: Large Structures]]
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[[Category: Tam JP]]
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[[Category: Xiao T]]

Current revision

Structure of roseltide rT1

PDB ID 5gsf

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