This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5nf8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:21, 14 June 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Solution structure of detergent-solubilized Rcf1, a yeast mitochondrial inner membrane protein involved in respiratory Complex III/IV supercomplex formation==
==Solution structure of detergent-solubilized Rcf1, a yeast mitochondrial inner membrane protein involved in respiratory Complex III/IV supercomplex formation==
-
<StructureSection load='5nf8' size='340' side='right' caption='[[5nf8]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''>
+
<StructureSection load='5nf8' size='340' side='right'caption='[[5nf8]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5nf8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NF8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NF8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5nf8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NF8 FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RCF1, AIM31, SCRG_01865 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nf8 OCA], [https://pdbe.org/5nf8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nf8 RCSB], [https://www.ebi.ac.uk/pdbsum/5nf8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nf8 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nf8 OCA], [http://pdbe.org/5nf8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nf8 RCSB], [http://www.ebi.ac.uk/pdbsum/5nf8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nf8 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RCF1_YEAS1 RCF1_YEAS1]] Cytochrome c oxidase subunit required for growth under hypoxic conditions. Involved in the assembly of the Complex III-Complex IV supercomplex, as well as in the recruitment of COX13 and RCF2 into cytochrome c oxidase. May also be required for late-stage assembly of the COX12 and COX13 subunits and for cytochrome c oxidase activity (By similarity).
+
[https://www.uniprot.org/uniprot/RCF1_YEAST RCF1_YEAST] Assembly factor that plays a role in the assembly of the respiratory chain supercomplexes (SCs) composed of ubiquinol-cytochrome c oxidoreductase (cytochrome b-c1 complex, complex III, CIII) and cytochrome c oxidase (complex IV, CIV). Involved in the recruitment of COX13 and RCF2 into cytochrome c oxidase. May also be required for late-stage assembly of the COX12 and COX13 subunits (PubMed:22342701, PubMed:22405070, PubMed:22310663). Required for the generation and maintenance of a normal proton motive force (PMF) across the inner mitochondrial membrane (IMM) by preventing proton leakage through an inactive population of CIV that accumulates when RCF1 and/or RCF2 proteins are absent (PubMed:30683696, PubMed:31591265).<ref>PMID:22310663</ref> <ref>PMID:22342701</ref> <ref>PMID:22405070</ref> <ref>PMID:30683696</ref> <ref>PMID:31591265</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 18824]]
+
[[Category: Large Structures]]
-
[[Category: Adelroth, P]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Brzezinski, P]]
+
[[Category: Adelroth P]]
-
[[Category: Hogbom, M]]
+
[[Category: Brzezinski P]]
-
[[Category: Maler, L]]
+
[[Category: Hogbom M]]
-
[[Category: Pettersson, P]]
+
[[Category: Maler L]]
-
[[Category: Sjoholm, J]]
+
[[Category: Pettersson P]]
-
[[Category: Sjostrand, D]]
+
[[Category: Sjoholm J]]
-
[[Category: Zhou, S]]
+
[[Category: Sjostrand D]]
-
[[Category: Charged dimer interface]]
+
[[Category: Zhou S]]
-
[[Category: Homodimer]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Solution structure]]
+

Current revision

Solution structure of detergent-solubilized Rcf1, a yeast mitochondrial inner membrane protein involved in respiratory Complex III/IV supercomplex formation

PDB ID 5nf8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools