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Lactate dehydrogenase 3D structures

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Current revision (07:31, 15 June 2023) (edit) (undo)
 
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Line 13: Line 13:
**[[3zzn]], [[4a73]]– TtL-LDH (mutant) <BR />
**[[3zzn]], [[4a73]]– TtL-LDH (mutant) <BR />
**[[2x8l]], [[1ceq]] – PfL-LDH – ''Plasmodium falciparum''<BR />
**[[2x8l]], [[1ceq]] – PfL-LDH – ''Plasmodium falciparum''<BR />
-
**[[2zqy]], [[2zqz]], [[1llc]] – LcL-LDH – ''Lactobacillus casei''<BR />
+
**[[2zqy]], [[2zqz]], [[1llc]], [[6jml]] – LcL-LDH – ''Lactobacillus casei''<BR />
**[[6j9s]] - LcL-LDH (mutant)<br />
**[[6j9s]] - LcL-LDH (mutant)<br />
**[[3d0o]] - SaL-LDH – ''Staphylococcus aureus''<BR />
**[[3d0o]] - SaL-LDH – ''Staphylococcus aureus''<BR />
Line 36: Line 36:
**[[6j9d]] – BmLDH (mutant)<br />
**[[6j9d]] – BmLDH (mutant)<br />
**[[6vdh]], [[6vdi]] – ApLDH - ''Apicomplexa''<br />
**[[6vdh]], [[6vdi]] – ApLDH - ''Apicomplexa''<br />
 +
**[[8ab2]] – CaL-LDH – ''Cyanobacterium aponium''<br />
 +
**[[7wn9]] – DdLDH – ''Dictyostelium discoideum''<br />
*L-LDH from yeast (cytochrome b2)
*L-LDH from yeast (cytochrome b2)
Line 48: Line 50:
*''L-LDH binary complex''
*''L-LDH binary complex''
-
**[[4ajp]], [[4m49]], [[4qsm]], [[4qt0]], [[5w8h]], [[5w8i]], [[5w8j]], [[6sbv]] – hLDH A chain + inhibitor <br />
+
**[[4ajp]], [[4m49]], [[4qsm]], [[4qt0]], [[5w8h]], [[5w8i]], [[5w8j]], [[6q13]], [[6sbv]] – hLDH A chain + inhibitor <br />
**[[4l4s]] – hLDH A chain + NAD <br />
**[[4l4s]] – hLDH A chain + NAD <br />
**[[5zje]] - hL-LDH A chain + malonate <br />
**[[5zje]] - hL-LDH A chain + malonate <br />
**[[5zjf]] - hL-LDH A chain + machilin<br />
**[[5zjf]] - hL-LDH A chain + machilin<br />
 +
**[[7dbk]] – hLDH B chain + NAD <br />
 +
**[[7epm]] – hLDH C chain + NAD <br />
**[[4i8x]], [[4i9h]], [[4i9n]], [[4i9u]] – rLDH A chain + pyridine derivative - rabbit<br />
**[[4i8x]], [[4i9h]], [[4i9n]], [[4i9u]] – rLDH A chain + pyridine derivative - rabbit<br />
**[[6p6u]] – rLDH A chain + AMP<br />
**[[6p6u]] – rLDH A chain + AMP<br />
 +
**[[7p4g]] – rLDH A chain + citrate<br />
**[[4aj1]], [[4aj2]], [[4aj4]], [[4aje]], [[4ajh]], [[4aji]], [[4ajj]], [[4ajk]], [[4ajl]], [[4ajn]], [[4ajo]], [[4al4]], [[5kkc]] – raL-LDH A chain + inhibitor – rat<br />
**[[4aj1]], [[4aj2]], [[4aj4]], [[4aje]], [[4ajh]], [[4aji]], [[4ajj]], [[4ajk]], [[4ajl]], [[4ajn]], [[4ajo]], [[4al4]], [[5kkc]] – raL-LDH A chain + inhibitor – rat<br />
**[[5es3]] – raL-LDH + oxamate<br />
**[[5es3]] – raL-LDH + oxamate<br />
Line 75: Line 80:
**[[6vdj]] – ApLDH + NAD derivative<br />
**[[6vdj]] – ApLDH + NAD derivative<br />
**[[7nay]] – LDH + NAD – ''Selenomonas ruminatium''<br />
**[[7nay]] – LDH + NAD – ''Selenomonas ruminatium''<br />
 +
**[[8grv]] – DdLDH + NAD <br />
*''L-LDH ternary complex with inhibitor''
*''L-LDH ternary complex with inhibitor''
Line 108: Line 114:
**[[6k13]] – BmLDH + NAD + oxamate <br />
**[[6k13]] – BmLDH + NAD + oxamate <br />
**[[6ct6]] – LDH + NAD + oxamate – ''Eimeria maxima''<br />
**[[6ct6]] – LDH + NAD + oxamate – ''Eimeria maxima''<br />
 +
**[[7qh2]] – LDH + FAD + Fe – ''Acetobacterium woodii'' – Cryo EM<br />
*''L-LDH ternary complex with reactants''
*''L-LDH ternary complex with reactants''
Line 115: Line 122:
**[[3h3j]] – SaL-LDH (mutant) + pyruvate + NAD<BR />
**[[3h3j]] – SaL-LDH (mutant) + pyruvate + NAD<BR />
**[[3d4p]] - SaL-LDH + pyruvate + NAD<BR />
**[[3d4p]] - SaL-LDH + pyruvate + NAD<BR />
-
**[[2fn7]] - CpLDH + lactate + NAD<BR />
+
**[[2fn7]], [[4nd3]] - CpLDH + lactate + NAD<BR />
**[[4nd2]] - CpLDH + pyruvate + NAD-analog<br />
**[[4nd2]] - CpLDH + pyruvate + NAD-analog<br />
**[[4nd4]] - CpLDH + pyruvate + NAD<BR />
**[[4nd4]] - CpLDH + pyruvate + NAD<BR />
Line 124: Line 131:
**[[4jnk]], [[6mv8]], [[6mva]] - hL-LDH A chain + inhibitor + lactate + NAD<br />
**[[4jnk]], [[6mv8]], [[6mva]] - hL-LDH A chain + inhibitor + lactate + NAD<br />
**[[4okn]] - hL-LDH A chain + katamycin+ oxalate + NAD<br />
**[[4okn]] - hL-LDH A chain + katamycin+ oxalate + NAD<br />
 +
**[[7dbj]] - hL-LDH B chain + inhibitor+ oxamate + NAD<br />
**[[3vph]] - TcL-LDH + oxamate + NAD + fructose diphosphate<br />
**[[3vph]] - TcL-LDH + oxamate + NAD + fructose diphosphate<br />
**[[6trx]] - PvL-LDH + GMP + UMP + AMP + CMP + malaria biomarker<br />
**[[6trx]] - PvL-LDH + GMP + UMP + AMP + CMP + malaria biomarker<br />
 +
**[[8ab3]] - CaL-LDH + inhibitor+ oxamate + NAD<br />
*D-LDH
*D-LDH
Line 132: Line 141:
**[[1j49]] – LdD-LDH + sulfate + NAD – ''Lactobacillus delbrueckii''<BR />
**[[1j49]] – LdD-LDH + sulfate + NAD – ''Lactobacillus delbrueckii''<BR />
**[[1j4a]] - LdD-LDH + sulfate<BR />
**[[1j4a]] - LdD-LDH + sulfate<BR />
-
**[[1f0x]] – EcD-LDH + FAD – ''Escherichia coli''<BR />
+
**[[4prk]], [[4prl]] - D-LDH – Lactobacillus jensenii<br />
 +
**[[3wx0]], [[5z1z]] – EcD-LDH – ''Escherichia coli''<br />
 +
**[[1f0x]] – EcD-LDH + FAD <BR />
**[[2dld]] - D-LDH + oxamate + NAD – ''Lactobacillus helveticus''<br />
**[[2dld]] - D-LDH + oxamate + NAD – ''Lactobacillus helveticus''<br />
-
**[[3wwy]], [[6abi]] – FnD-LDH – ''Fusobacterium nucleatum''<br />
+
**[[6abi]] – FnD-LDH – ''Fusobacterium nucleatum''<br />
**[[5z21]] – FnD-LDH + NAD + oxamate<br />
**[[5z21]] – FnD-LDH + NAD + oxamate<br />
-
**[[3wwz]], [[6abj]] – PaD-LDH – ''Peudomonas aeruginosa''<br />
+
**[[6abj]] – PaD-LDH – ''Peudomonas aeruginosa''<br />
**[[5z20]] – FnD-LDH + NAD + oxamate<br />
**[[5z20]] – FnD-LDH + NAD + oxamate<br />
**[[4xkj]] – D-LDH + NAD – ''Sporolactobacillus inulinus''<br />
**[[4xkj]] – D-LDH + NAD – ''Sporolactobacillus inulinus''<br />

Current revision

3D structures of lactate dehydrogenase

Updated on 15-June-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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