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Mannosidase 3D structures

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(New page: ==3D structures of mannosidase== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *α-MAN **1o7d - αMAN – bov...)
Current revision (07:51, 27 June 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 6: Line 6:
**[[1o7d]] - αMAN – bovine<br />
**[[1o7d]] - αMAN – bovine<br />
-
**[[6b9o]] - jbMAN – jack bean<br />
+
**[[6b9o]] - jbαMAN – jack bean<br />
-
**[[2wvy]], [[2ww2]], [[4acy]], [[4acz]], [[4ad0]], [[4c1s]] - αMAN - ''Bacterioides thetaiotaomicron''<br />
+
**[[6lz1]] - αMAN – fission yeast – Cryo EM<br />
 +
**[[2wvx]], [[2wvy]], [[2ww2]], [[4acy]], [[4acz]], [[4ad0]], [[4c1s]] - αMAN - ''Bacterioides thetaiotaomicron''<br />
**[[1hcu]] - TrαMAN – ''Trichoderma reesei''<br />
**[[1hcu]] - TrαMAN – ''Trichoderma reesei''<br />
 +
**[[7ufr]], [[7uft]] - BlaMAN – ''Bifidobacterium longum'' – Cryo EM<br />
*α-MAN class I
*α-MAN class I
Line 25: Line 27:
**[[2ri9]] - PcαMAN I + substrate analog<br />
**[[2ri9]] - PcαMAN I + substrate analog<br />
**[[1krf]] - PcαMAN I + kifunensine + mannose<br />
**[[1krf]] - PcαMAN I + kifunensine + mannose<br />
- 
*α-MAN class II
*α-MAN class II
-
**[[2wyh]] - SpαMAN II – ''Streptococcus pyrogenes''<br />
+
**[[3bub]], [[1hty]], [[6rpc]] - DmαMAN II catalytic domain – ''Drosophila melanogaster''<br />
-
**[[3bub]], [[1hty]] - DmαMAN II catalytic domain – ''Drosophila melanogaster''<br />
+
**[[3bud]] - DmαMAN II catalytic domain (mutant) <br />
**[[3bud]] - DmαMAN II catalytic domain (mutant) <br />
**[[3bui]] - DmαMAN II catalytic domain (mutant) + Tris<br />
**[[3bui]] - DmαMAN II catalytic domain (mutant) + Tris<br />
**[[3bup]], [[3buq]], [[3czs]] - DmαMAN II catalytic domain (mutant) + mannose<br />
**[[3bup]], [[3buq]], [[3czs]] - DmαMAN II catalytic domain (mutant) + mannose<br />
 +
**[[6rqz]], [[6rrh]] – DmαMAN II + mannose derivative<br />
 +
**[[6rrj]], [[6rrn]], [[6rru]], [[6rrw]], [[6rrx]], [[6rry]], [[6rs0]] – DmαMAN II + aziridine derivative<br />
**[[3bvt]], [[3bvu]], [[3bvv]], [[3bvw]], [[3bvx]] - DmαMAN II catalytic domain (mutant) + mannopyranoside<br />
**[[3bvt]], [[3bvu]], [[3bvv]], [[3bvw]], [[3bvx]] - DmαMAN II catalytic domain (mutant) + mannopyranoside<br />
**[[1r33]], [[1r34]] - DmαMAN II catalytic domain + mannopyranoside<br />
**[[1r33]], [[1r34]] - DmαMAN II catalytic domain + mannopyranoside<br />
Line 53: Line 55:
**[[1hxk]] - DmαMAN II catalytic domain + deoxymannojirimycin<br />
**[[1hxk]] - DmαMAN II catalytic domain + deoxymannojirimycin<br />
**[[1qwu]] - DmαMAN II catalytic domain (mutant) + guloside<br />
**[[1qwu]] - DmαMAN II catalytic domain (mutant) + guloside<br />
-
**[[1qx1]] - DmαMAN II catalytic domain (mutant) + mannosyl
+
**[[1qx1]] - DmαMAN II catalytic domain (mutant) + mannosyl<br />
 +
**[[2wyh]] - SpαMAN II – ''Streptococcus pyrogenes''<br />
*α-1,2-MAN
*α-1,2-MAN
Line 64: Line 67:
**[[5kij]] – hαMAN + mannose derivative<br />
**[[5kij]] – hαMAN + mannose derivative<br />
**[[5kk7]] – hαMAN (mutant) + disaccharide derivative<br />
**[[5kk7]] – hαMAN (mutant) + disaccharide derivative<br />
 +
**[[6dwo]] – EfαMAN – ''Enterococcus faecalis''<br />
 +
**[[7fe2]] – EfαMAN (mutant) + mannose derivative<br />
 +
**[[7nsn]] – αMAN + mannose derivative – Neobacillus novalis<br />
*β-MAN
*β-MAN
-
**[[6dtt]] - mMAN <br />
+
**[[6ddt]] - mMAN <br />
**[[6ddu]] - mMAN + β-mannose <br />
**[[6ddu]] - mMAN + β-mannose <br />
 +
**[[4jho]] - rβMAN – rice<br />
 +
**[[4jie]] - rβMAN + β-mannose<br />
**[[2je8]] - BtβMAN residues 26-864 <br />
**[[2je8]] - BtβMAN residues 26-864 <br />
**[[2wbk]] - BtβMAN residues 26-864 + mannopyranoside <br />
**[[2wbk]] - BtβMAN residues 26-864 + mannopyranoside <br />
Line 77: Line 85:
**[[1uuq]] - CmβMAN<br />
**[[1uuq]] - CmβMAN<br />
**[[2whk]] - βMAN – ''Bacillus subtilis''<br />
**[[2whk]] - βMAN – ''Bacillus subtilis''<br />
-
**[[4jho]] - rβMAN – rice<br />
 
-
**[[4jie]] - rβMAN + β-mannose<br />
 
**[[4cvu]], [[4uoj]] – βMAN - ''Trichoderma harzianum''<br />
**[[4cvu]], [[4uoj]] – βMAN - ''Trichoderma harzianum''<br />
**[[5n6u]] - βMAN + β-mannose – ''Dictyoglomus thermophilum''<br />
**[[5n6u]] - βMAN + β-mannose – ''Dictyoglomus thermophilum''<br />
Line 84: Line 90:
**[[6byg]], [[6byi]] - XaMAN (mutant)<br />
**[[6byg]], [[6byi]] - XaMAN (mutant)<br />
**[[6bye]] - XaMAN + β-mannose<br />
**[[6bye]] - XaMAN + β-mannose<br />
-
**[[4zxo]] - MAN – ''Bacterioides ovatus''<br />
+
**[[4zxo]] - BoMAN – ''Bacterioides ovatus''<br />
**[[2whj]] - BaMAN – ''Bacillus agaradhaerens''<br />
**[[2whj]] - BaMAN – ''Bacillus agaradhaerens''<br />
**[[2whl]] - BaMAN + β-mannose <br />
**[[2whl]] - BaMAN + β-mannose <br />
 +
**[[6t5o]] - BsMAN – ''Bacterioides salyersiae''<br />
 +
**[[6t7g]] - BsMAN + mannose derivative <br />
 +
**[[6t6g]] - BsMAN + noeuromycin<br />
 +
**[[6mp2]], [[6mpa]] - BlMAN <br />
 +
**[[6moy]], [[6mp7]], [[6mpc]] - BlMAN (mutant) <br />
 +
**[[7op7]] - BtMAN + aziridine derivative <br />
*Mannan endo-1,4-β-MAN
*Mannan endo-1,4-β-MAN
 +
**[[2c0h]] - βMAN (mutant) – blue mussel<br />
 +
**[[1rh9]] – βMAN – ''Solanum lycopersicum''<br />
**[[1gvy]], [[1odz]], [[1gw1]], [[2whm]] - PcβMAN (mutant) + mannose derivative – ''Pseudomonas cellulosa''<br />
**[[1gvy]], [[1odz]], [[1gw1]], [[2whm]] - PcβMAN (mutant) + mannose derivative – ''Pseudomonas cellulosa''<br />
**[[1j9y]], [[1r7o]] - PcβMAN<br />
**[[1j9y]], [[1r7o]] - PcβMAN<br />
-
**[[2c0h]] - βMAN (mutant) – blue mussel<br />
 
**[[2whk]], [[4yn5]], [[3jug]], [[2qha]] - βMAN – ''Bacillus subtilis''<br />
**[[2whk]], [[4yn5]], [[3jug]], [[2qha]] - βMAN – ''Bacillus subtilis''<br />
-
**[[1rh9]] – βMAN – ''Solanum lycopersicum''<br />
 
**[[3pz9]], [[3pzg]] – TpβMAN – ''Thermotoga petrophila''<br />
**[[3pz9]], [[3pzg]] – TpβMAN – ''Thermotoga petrophila''<br />
**[[3pzi]] – TpβMAN + glucose<br />
**[[3pzi]] – TpβMAN + glucose<br />
Line 107: Line 119:
**[[4utf]] - BxαMAN – ''Bacterioides xylanisolvens''<br />
**[[4utf]] - BxαMAN – ''Bacterioides xylanisolvens''<br />
**[[4ad5]], [[4ad4]], [[4ad3]], [[4ad2]], [[4ad1]] – BxαMAN + mannose derivative<br />
**[[4ad5]], [[4ad4]], [[4ad3]], [[4ad2]], [[4ad1]] – BxαMAN + mannose derivative<br />
 +
 +
*Endo-α-1,2-MAN
 +
 +
**[[6zdc]], [[6zdf]], [[6zdk]], [[6zfq]] – hαMAN catalytic domain<br />
 +
**[[6zj5]] – hαMAN catalytic domain + glucosamine derivative<br />
 +
**[[6zj1]] – hαMAN catalytic domain (mutant) + glycan fragment<br />
 +
**[[6zfn]] – hαMAN catalytic domain (mutant) + mannobiose<br />
 +
**[[6zfa]] – hαMAN catalytic domain + mannobiose + Glc derivative<br />
 +
**[[6zfl]] – hαMAN catalytic domain + Glc derivative<br />
 +
 +
*Endo-α-1,6-MAN
 +
 +
**[[6ry0]] - CtαMAN – ''Chaetonium thermofilum''<br />
 +
**[[6ry1]] – CtαMAN + mannose<br />
 +
**[[6ry2]], [[6ry5]] – CtαMAN + mannobiose<br />
 +
**[[6ry6]] – CtαMAN + glucosamine<br />
 +
**[[6ry7]] – CtαMAN + laminaribiose<br />
*Exo-β-1,4-MAN
*Exo-β-1,4-MAN
Line 115: Line 144:
**[[4nrs]] - RmβMAN (mutant) + mannobiose<br />
**[[4nrs]] - RmβMAN (mutant) + mannobiose<br />
**[[6gvb]] - βMAN – ''Cutibacterium acnes''<br />
**[[6gvb]] - βMAN – ''Cutibacterium acnes''<br />
 +
**[[7bob]] - MAN – ''Opitutaceae bacterium''<br />
 +
**[[7odj]] – CmβMAN + mannose derivative<br />
*Exo-α-1,6-MAN
*Exo-α-1,6-MAN

Current revision

3D structures of mannosidase

Updated on 27-June-2023

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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