This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5dl8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (21:47, 28 June 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
 +
==Crystal structure of Acinetobacter baumannii OccAB4==
==Crystal structure of Acinetobacter baumannii OccAB4==
-
<StructureSection load='5dl8' size='340' side='right' caption='[[5dl8]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='5dl8' size='340' side='right'caption='[[5dl8]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5dl8]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DL8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DL8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5dl8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baumannii_AB307-0294 Acinetobacter baumannii AB307-0294]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DL8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DL8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dl8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dl8 OCA], [http://pdbe.org/5dl8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dl8 RCSB], [http://www.ebi.ac.uk/pdbsum/5dl8 PDBsum]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dl8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dl8 OCA], [https://pdbe.org/5dl8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dl8 RCSB], [https://www.ebi.ac.uk/pdbsum/5dl8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dl8 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0D5YI36_ACIBA A0A0D5YI36_ACIBA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Basle, A]]
+
[[Category: Acinetobacter baumannii AB307-0294]]
-
[[Category: Berg, B van den]]
+
[[Category: Large Structures]]
-
[[Category: Zahn, M]]
+
[[Category: Basle A]]
-
[[Category: Acinetobacter baumannii]]
+
[[Category: Zahn M]]
-
[[Category: Antibiotic uptake]]
+
[[Category: Van den Berg B]]
-
[[Category: Beta-barrel]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Outer membrane protein]]
+

Current revision

Crystal structure of Acinetobacter baumannii OccAB4

PDB ID 5dl8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools