This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5dte

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (21:58, 28 June 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
 +
==Crystal Structure of an ABC transporter periplasmic solute binding protein (IPR025997) from Actinobacillus succinogenes 130z(Asuc_0081, TARGET EFI-511065) with bound D-allose==
==Crystal Structure of an ABC transporter periplasmic solute binding protein (IPR025997) from Actinobacillus succinogenes 130z(Asuc_0081, TARGET EFI-511065) with bound D-allose==
-
<StructureSection load='5dte' size='340' side='right' caption='[[5dte]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
+
<StructureSection load='5dte' size='340' side='right'caption='[[5dte]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5dte]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DTE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DTE FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5dte]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinobacillus_succinogenes_130Z Actinobacillus succinogenes 130Z]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DTE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DTE FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ALL:D-ALLOPYRANOSE'>ALL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Monosaccharide-transporting_ATPase Monosaccharide-transporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.17 3.6.3.17] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALL:D-ALLOPYRANOSE'>ALL</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dte FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dte OCA], [http://pdbe.org/5dte PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dte RCSB], [http://www.ebi.ac.uk/pdbsum/5dte PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dte FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dte OCA], [https://pdbe.org/5dte PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dte RCSB], [https://www.ebi.ac.uk/pdbsum/5dte PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dte ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A6VKG5_ACTSZ A6VKG5_ACTSZ]
 +
 +
==See Also==
 +
*[[ATPase 3D structures|ATPase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Monosaccharide-transporting ATPase]]
+
[[Category: Actinobacillus succinogenes 130Z]]
-
[[Category: Almo, S C]]
+
[[Category: Large Structures]]
-
[[Category: Attonito, J D]]
+
[[Category: Al Obaidi NF]]
-
[[Category: Benach, J]]
+
[[Category: Almo SC]]
-
[[Category: Chamala, S]]
+
[[Category: Attonito JD]]
-
[[Category: Chowdhury, S]]
+
[[Category: Benach J]]
-
[[Category: EFI, Enzyme Function Initiative]]
+
[[Category: Chamala S]]
-
[[Category: Gerlt, J A]]
+
[[Category: Chowdhury S]]
-
[[Category: Glenn, A Scott]]
+
[[Category: Gerlt JA]]
-
[[Category: Koss, J]]
+
[[Category: Koss J]]
-
[[Category: Lafleur, J]]
+
[[Category: Lafleur J]]
-
[[Category: Love, J]]
+
[[Category: Love J]]
-
[[Category: Morisco, L L]]
+
[[Category: Morisco LL]]
-
[[Category: Obaidi, N F.Al]]
+
[[Category: Scott Glenn A]]
-
[[Category: Seidel, R D]]
+
[[Category: Seidel RD]]
-
[[Category: Toro, R]]
+
[[Category: Toro R]]
-
[[Category: Vetting, M W]]
+
[[Category: Vetting MW]]
-
[[Category: Wasserman, S R]]
+
[[Category: Wasserman SR]]
-
[[Category: Whalen, K L]]
+
[[Category: Whalen KL]]
-
[[Category: Yadava, U]]
+
[[Category: Yadava U]]
-
[[Category: Efi]]
+
-
[[Category: Enzyme function initiative]]
+
-
[[Category: Solute binding protein]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal Structure of an ABC transporter periplasmic solute binding protein (IPR025997) from Actinobacillus succinogenes 130z(Asuc_0081, TARGET EFI-511065) with bound D-allose

PDB ID 5dte

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools