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5dwf

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Current revision (22:03, 28 June 2023) (edit) (undo)
 
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<StructureSection load='5dwf' size='340' side='right'caption='[[5dwf]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
<StructureSection load='5dwf' size='340' side='right'caption='[[5dwf]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5dwf]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabian_camel Arabian camel]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DWF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DWF FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5dwf]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Camelus_dromedarius Camelus dromedarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DWF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DWF FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PGLYRP1, PGLYRP, PGRP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9838 Arabian camel])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5dwf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dwf OCA], [http://pdbe.org/5dwf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dwf RCSB], [http://www.ebi.ac.uk/pdbsum/5dwf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dwf ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dwf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dwf OCA], [https://pdbe.org/5dwf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dwf RCSB], [https://www.ebi.ac.uk/pdbsum/5dwf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dwf ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/PGRP1_CAMDR PGRP1_CAMDR]] Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. Has bactericidal activity towards Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Binds also to Gram-negative bacteria. Involved in innate immunity. Is microbicidal for Gram-positive and Gram-negative bacteria and yeast. May function in intracellular killing of bacteria (By similarity).
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[https://www.uniprot.org/uniprot/PGRP1_CAMDR PGRP1_CAMDR] Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. Has bactericidal activity towards Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Binds also to Gram-negative bacteria. Involved in innate immunity. Is microbicidal for Gram-positive and Gram-negative bacteria and yeast. May function in intracellular killing of bacteria (By similarity).
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Arabian camel]]
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[[Category: Camelus dromedarius]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Kaur, P]]
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[[Category: Kaur P]]
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[[Category: Sharma, P]]
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[[Category: Sharma P]]
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[[Category: Sharma, S]]
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[[Category: Sharma S]]
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[[Category: Singh, P K]]
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[[Category: Singh PK]]
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[[Category: Singh, T P]]
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[[Category: Singh TP]]
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[[Category: Yadav, S P]]
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[[Category: Yadav SP]]
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[[Category: Complex]]
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[[Category: Ethylene glycol]]
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[[Category: Immune system]]
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[[Category: Pgrp]]
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Current revision

Crystal structure of the complex of Peptidoglycan recognition protein, PGRP-S from camel with ethylene glycol at 1.83 A resolution

PDB ID 5dwf

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