This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5dxl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:04, 28 June 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5dxl' size='340' side='right'caption='[[5dxl]], [[Resolution|resolution]] 1.57&Aring;' scene=''>
<StructureSection load='5dxl' size='340' side='right'caption='[[5dxl]], [[Resolution|resolution]] 1.57&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5dxl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspfu Aspfu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DXL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DXL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5dxl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_fumigatus_Af293 Aspergillus fumigatus Af293]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DXL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DXL FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.573&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5dxi|5dxi]], [[5dx9|5dx9]], [[5dxf|5dxf]], [[5dxn|5dxn]], [[5dxo|5dxo]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AFUA_3G05650 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=330879 ASPFU])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dxl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dxl OCA], [https://pdbe.org/5dxl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dxl RCSB], [https://www.ebi.ac.uk/pdbsum/5dxl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dxl ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha,alpha-trehalose-phosphate_synthase_(UDP-forming) Alpha,alpha-trehalose-phosphate synthase (UDP-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.15 2.4.1.15] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dxl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dxl OCA], [http://pdbe.org/5dxl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dxl RCSB], [http://www.ebi.ac.uk/pdbsum/5dxl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dxl ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q4WWF5_ASPFU Q4WWF5_ASPFU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aspfu]]
+
[[Category: Aspergillus fumigatus Af293]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Brennan, R G]]
+
[[Category: Brennan RG]]
-
[[Category: Miao, Y]]
+
[[Category: Miao Y]]
-
[[Category: Hydrolase]]
+
-
[[Category: Phosphatase]]
+
-
[[Category: Trehalose-6-phosphate]]
+

Current revision

Structure of Aspergillus fumigatus trehalose-6-phosphate phosphatase crystal form 1

PDB ID 5dxl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools