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5f2f

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Current revision (08:42, 12 July 2023) (edit) (undo)
 
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<StructureSection load='5f2f' size='340' side='right'caption='[[5f2f]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
<StructureSection load='5f2f' size='340' side='right'caption='[[5f2f]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5f2f]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_j96 Escherichia coli j96]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5F2F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5F2F FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5f2f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_J96 Escherichia coli J96]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5F2F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5F2F FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5U7:5-[4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(HYDROXYMETHYL)-3,4,5-TRIS(OXIDANYL)OXAN-2-YL]OXY-3-METHYL-PHENYL]-~{N}1,~{N}3-DIMETHYL-BENZENE-1,3-DICARBOXAMIDE'>5U7</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.665&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fimH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1206108 Escherichia coli J96])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5U7:5-[4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(HYDROXYMETHYL)-3,4,5-TRIS(OXIDANYL)OXAN-2-YL]OXY-3-METHYL-PHENYL]-~{N}1,~{N}3-DIMETHYL-BENZENE-1,3-DICARBOXAMIDE'>5U7</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5f2f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5f2f OCA], [http://pdbe.org/5f2f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5f2f RCSB], [http://www.ebi.ac.uk/pdbsum/5f2f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5f2f ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5f2f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5f2f OCA], [https://pdbe.org/5f2f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5f2f RCSB], [https://www.ebi.ac.uk/pdbsum/5f2f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5f2f ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/FIMH_ECOLI FIMH_ECOLI]] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Adhesin responsible for the binding to D-mannose. It is laterally positioned at intervals in the structure of the type 1 fimbriae. In order to integrate FimH in the fimbriae FimF and FimG are needed.
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[https://www.uniprot.org/uniprot/FIMH_ECOLI FIMH_ECOLI] Involved in regulation of length and mediation of adhesion of type 1 fimbriae (but not necessary for the production of fimbriae). Adhesin responsible for the binding to D-mannose. It is laterally positioned at intervals in the structure of the type 1 fimbriae. In order to integrate FimH in the fimbriae FimF and FimG are needed.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Escherichia coli j96]]
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[[Category: Escherichia coli J96]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Hultgren, S J]]
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[[Category: Hultgren SJ]]
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[[Category: Kalas, V]]
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[[Category: Kalas V]]
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[[Category: Carbohydrate binding protein]]
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[[Category: Immunoglobulin fold]]
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[[Category: Lectin]]
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[[Category: Mannoside]]
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[[Category: Sugar binding protein]]
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Current revision

Crystal structure of para-biphenyl-2-methyl-3', 5' di-methyl amide mannoside bound to FimH lectin domain

PDB ID 5f2f

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