This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3k3u
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata== | ==The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata== | ||
| - | <StructureSection load='3k3u' size='340' side='right' caption='[[3k3u]], [[Resolution|resolution]] 1.63Å' scene=''> | + | <StructureSection load='3k3u' size='340' side='right'caption='[[3k3u]], [[Resolution|resolution]] 1.63Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3k3u]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3k3u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Amphitrite_ornata Amphitrite ornata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K3U FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k3u OCA], [https://pdbe.org/3k3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k3u RCSB], [https://www.ebi.ac.uk/pdbsum/3k3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k3u ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9NAV8_9ANNE Q9NAV8_9ANNE] | ||
==See Also== | ==See Also== | ||
| - | *[[Dehaloperoxidase|Dehaloperoxidase]] | + | *[[Dehaloperoxidase 3D structures|Dehaloperoxidase 3D structures]] |
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]] | *[[Hemoglobin 3D structures|Hemoglobin 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Amphitrite ornata]] | [[Category: Amphitrite ornata]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Davis MF]] |
| - | [[Category: | + | [[Category: Franzen S]] |
| - | [[Category: | + | [[Category: De Serrano V]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
The V59W mutation blocks the distal pocket of the hemoglobin dehaloperoxidase from Amphitrite ornata
| |||||||||||
