This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5fbu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:45, 19 July 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin-phosphate==
==Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin-phosphate==
-
<StructureSection load='5fbu' size='340' side='right' caption='[[5fbu]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
+
<StructureSection load='5fbu' size='340' side='right'caption='[[5fbu]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5fbu]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FBU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FBU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5fbu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._F2365 Listeria monocytogenes serotype 4b str. F2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FBU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5WP:RIFAMPIN-PHOSPHATE'>5WP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fbt|5fbt]], [[5fbs|5fbs]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5WP:RIFAMPIN-PHOSPHATE'>5WP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fbu OCA], [http://pdbe.org/5fbu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fbu RCSB], [http://www.ebi.ac.uk/pdbsum/5fbu PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fbu OCA], [https://pdbe.org/5fbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fbu RCSB], [https://www.ebi.ac.uk/pdbsum/5fbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fbu ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0X1KHF9_LISMF A0A0X1KHF9_LISMF]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Anderson, W F]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Listeria monocytogenes serotype 4b str. F2365]]
-
[[Category: Savchenko, A]]
+
[[Category: Anderson WF]]
-
[[Category: Skarina, T]]
+
[[Category: Savchenko A]]
-
[[Category: Stogios, P J]]
+
[[Category: Skarina T]]
-
[[Category: Wawrzak, Z]]
+
[[Category: Stogios PJ]]
-
[[Category: Yim, V]]
+
[[Category: Wawrzak Z]]
-
[[Category: Antibiotic resistance]]
+
[[Category: Yim V]]
-
[[Category: Atp grasp domain]]
+
-
[[Category: Csgid]]
+
-
[[Category: Phosphohistidine domain]]
+
-
[[Category: Phosphotransferase]]
+
-
[[Category: Rifampin]]
+
-
[[Category: Rifamycin]]
+
-
[[Category: Transferase-antibiotic complex]]
+

Current revision

Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin-phosphate

PDB ID 5fbu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5fbu"
Personal tools