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5fft

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Current revision (06:49, 19 July 2023) (edit) (undo)
 
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<StructureSection load='5fft' size='340' side='right'caption='[[5fft]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='5fft' size='340' side='right'caption='[[5fft]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5fft]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FFT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FFT FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5fft]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FFT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FFT FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SME:METHIONINE+SULFOXIDE'>SME</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SME:METHIONINE+SULFOXIDE'>SME</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5ffr|5ffr]], [[5ffs|5ffs]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fft FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fft OCA], [https://pdbe.org/5fft PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fft RCSB], [https://www.ebi.ac.uk/pdbsum/5fft PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fft ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Sftpa1, Sftp-1, Sftp1, Sftpa ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fft FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fft OCA], [http://pdbe.org/5fft PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fft RCSB], [http://www.ebi.ac.uk/pdbsum/5fft PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fft ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SFTPA_RAT SFTPA_RAT]] In presence of calcium ions, it binds to surfactant phospholipids and contributes to lower the surface tension at the air-liquid interface in the alveoli of the mammalian lung and is essential for normal respiration.
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[https://www.uniprot.org/uniprot/SFTPA_RAT SFTPA_RAT] In presence of calcium ions, it binds to surfactant phospholipids and contributes to lower the surface tension at the air-liquid interface in the alveoli of the mammalian lung and is essential for normal respiration.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Buffalo rat]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Goh, B C]]
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[[Category: Rattus norvegicus]]
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[[Category: McCormack, F X]]
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[[Category: Goh BC]]
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[[Category: Rynkiewicz, M J]]
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[[Category: McCormack FX]]
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[[Category: Schulten, K]]
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[[Category: Rynkiewicz MJ]]
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[[Category: Seaton, B A]]
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[[Category: Schulten K]]
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[[Category: Wu, H]]
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[[Category: Seaton BA]]
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[[Category: Carbohydrate binding]]
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[[Category: Wu H]]
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[[Category: Collectin]]
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[[Category: Lectin]]
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[[Category: Lipid binding]]
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[[Category: Sugar binding protein]]
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Current revision

Crystal Structure of Surfactant Protein-A Y221A Mutant

PDB ID 5fft

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