This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


8ib1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "8ib1" [edit=sysop:move=sysop])
Current revision (12:39, 26 July 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8ib1 is ON HOLD
+
==Structure of the LAH31 Fab bound to an influenza virus HA epitope peptide==
-
 
+
<StructureSection load='8ib1' size='340' side='right'caption='[[8ib1]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
Authors:
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[8ib1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8IB1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8IB1 FirstGlance]. <br>
-
Description:
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ib1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ib1 OCA], [https://pdbe.org/8ib1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ib1 RCSB], [https://www.ebi.ac.uk/pdbsum/8ib1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ib1 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HEMA_I89A7 HEMA_I89A7] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore (By similarity).
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Influenza A virus]]
 +
[[Category: Large Structures]]
 +
[[Category: Hashiguchi T]]
 +
[[Category: Suzuki T]]

Current revision

Structure of the LAH31 Fab bound to an influenza virus HA epitope peptide

PDB ID 8ib1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools