This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3n4m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:45, 26 July 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3n4m.jpg|left|200px]]
 
-
<!--
+
==E. coli RNA polymerase alpha subunit C-terminal domain in complex with CAP and DNA==
-
The line below this paragraph, containing "STRUCTURE_3n4m", creates the "Structure Box" on the page.
+
<StructureSection load='3n4m' size='340' side='right'caption='[[3n4m]], [[Resolution|resolution]] 2.99&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3n4m]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3N4M FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.987&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMP:ADENOSINE-3,5-CYCLIC-MONOPHOSPHATE'>CMP</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
{{STRUCTURE_3n4m| PDB=3n4m | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3n4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3n4m OCA], [https://pdbe.org/3n4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3n4m RCSB], [https://www.ebi.ac.uk/pdbsum/3n4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3n4m ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CRP_ECOLI CRP_ECOLI] This protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA. Acts as a negative regulator of its own synthesis as well as for adenylate cyclase (cyaA), which generates cAMP.<ref>PMID:2982847</ref>
-
===E. coli RNA polymerase alpha subunit C-terminal domain in complex with CAP and DNA===
+
==See Also==
-
 
+
*[[Catabolite gene activator protein 3D structures|Catabolite gene activator protein 3D structures]]
-
 
+
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
-
==About this Structure==
+
== References ==
-
[[3n4m]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3N4M OCA].
+
<references/>
-
[[Category: DNA-directed RNA polymerase]]
+
__TOC__
-
[[Category: Escherichia coli]]
+
</StructureSection>
-
[[Category: Birktoft, J J.]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Lara-Gonzalez, S.]]
+
[[Category: Large Structures]]
-
[[Category: Lawson, C L.]]
+
[[Category: Birktoft JJ]]
 +
[[Category: Lara-Gonzalez S]]
 +
[[Category: Lawson CL]]

Current revision

E. coli RNA polymerase alpha subunit C-terminal domain in complex with CAP and DNA

PDB ID 3n4m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools