This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5fq1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:18, 26 July 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Structure of the cytoplasmic PAS domain of the Geobacillus thermodenitrificans histidine kinase CitA==
==Structure of the cytoplasmic PAS domain of the Geobacillus thermodenitrificans histidine kinase CitA==
-
<StructureSection load='5fq1' size='340' side='right' caption='[[5fq1]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
+
<StructureSection load='5fq1' size='340' side='right'caption='[[5fq1]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5fq1]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FQ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FQ1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5fq1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_thermodenitrificans Geobacillus thermodenitrificans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FQ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FQ1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidine_kinase Histidine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.13.3 2.7.13.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fq1 OCA], [https://pdbe.org/5fq1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fq1 RCSB], [https://www.ebi.ac.uk/pdbsum/5fq1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fq1 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fq1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fq1 OCA], [http://pdbe.org/5fq1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fq1 RCSB], [http://www.ebi.ac.uk/pdbsum/5fq1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fq1 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A4IPE6_GEOTN A4IPE6_GEOTN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Histidine kinase]]
+
[[Category: Geobacillus thermodenitrificans]]
-
[[Category: Becker, S]]
+
[[Category: Large Structures]]
-
[[Category: Giller, K]]
+
[[Category: Becker S]]
-
[[Category: Schomburg, B]]
+
[[Category: Giller K]]
-
[[Category: Cita]]
+
[[Category: Schomburg B]]
-
[[Category: Pas domain]]
+
-
[[Category: Transferase]]
+
-
[[Category: Transmembrane signaling]]
+

Current revision

Structure of the cytoplasmic PAS domain of the Geobacillus thermodenitrificans histidine kinase CitA

PDB ID 5fq1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools