This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5g41

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:38, 26 July 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5g41' size='340' side='right'caption='[[5g41]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
<StructureSection load='5g41' size='340' side='right'caption='[[5g41]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5g41]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Synthetic_construct_sequences Synthetic construct sequences]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5G41 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5G41 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5g41]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5G41 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5G41 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5g3y|5g3y]], [[5g3z|5g3z]], [[5g40|5g40]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AP5:BIS(ADENOSINE)-5-PENTAPHOSPHATE'>AP5</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5g41 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5g41 OCA], [https://pdbe.org/5g41 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5g41 RCSB], [https://www.ebi.ac.uk/pdbsum/5g41 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5g41 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5g41 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5g41 OCA], [http://pdbe.org/5g41 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5g41 RCSB], [http://www.ebi.ac.uk/pdbsum/5g41 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5g41 ProSAT]</span></td></tr>
+
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 22: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Adenylate kinase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Synthetic construct sequences]]
+
[[Category: Synthetic construct]]
-
[[Category: English, J]]
+
[[Category: English J]]
-
[[Category: Kern, D]]
+
[[Category: Kern D]]
-
[[Category: Kutter, S]]
+
[[Category: Kutter S]]
-
[[Category: Nguyen, V]]
+
[[Category: Nguyen V]]
-
[[Category: Adp]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Phosphoryl transfer]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of adenylate kinase ancestor 4 with Zn, Mg and Ap5A bound

PDB ID 5g41

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5g41"
Personal tools