This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1a6p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:48, 2 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==ENGINEERING OF A MISFOLDED FORM OF CD2==
==ENGINEERING OF A MISFOLDED FORM OF CD2==
-
<StructureSection load='1a6p' size='340' side='right' caption='[[1a6p]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
+
<StructureSection load='1a6p' size='340' side='right'caption='[[1a6p]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1a6p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A6P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1A6P FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1a6p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A6P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1A6P FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1a6p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a6p OCA], [http://pdbe.org/1a6p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1a6p RCSB], [http://www.ebi.ac.uk/pdbsum/1a6p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1a6p ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.08&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1a6p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a6p OCA], [https://pdbe.org/1a6p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1a6p RCSB], [https://www.ebi.ac.uk/pdbsum/1a6p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1a6p ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CD2_RAT CD2_RAT]] CD2 interacts with lymphocyte function-associated antigen (LFA-3) and CD48/BCM1 to mediate adhesion between T-cells and other cell types. CD2 is implicated in the triggering of T-cells, the cytoplasmic domain is implicated in the signaling function.
+
[https://www.uniprot.org/uniprot/CD2_RAT CD2_RAT] CD2 interacts with lymphocyte function-associated antigen (LFA-3) and CD48/BCM1 to mediate adhesion between T-cells and other cell types. CD2 is implicated in the triggering of T-cells, the cytoplasmic domain is implicated in the signaling function.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a6/1a6p_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a6/1a6p_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 34: Line 35:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Buffalo rat]]
+
[[Category: Large Structures]]
-
[[Category: Barker, J J]]
+
[[Category: Rattus norvegicus]]
-
[[Category: Brady, R L]]
+
[[Category: Barker JJ]]
-
[[Category: Head, J G]]
+
[[Category: Brady RL]]
-
[[Category: Murray, A J]]
+
[[Category: Head JG]]
-
[[Category: Cell adhesion]]
+
[[Category: Murray AJ]]
-
[[Category: Domain swapping]]
+
-
[[Category: Hinge loop]]
+
-
[[Category: Oligomer evolution]]
+
-
[[Category: T lymphocyte adhesion glycoprotein]]
+

Current revision

ENGINEERING OF A MISFOLDED FORM OF CD2

PDB ID 1a6p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools