This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1al4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:53, 2 August 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
 +
==GRAMICIDIN D FROM BACILLUS BREVIS (N-PROPANOL SOLVATE)==
==GRAMICIDIN D FROM BACILLUS BREVIS (N-PROPANOL SOLVATE)==
-
<StructureSection load='1al4' size='340' side='right' caption='[[1al4]], [[Resolution|resolution]] 1.13&Aring;' scene=''>
+
<StructureSection load='1al4' size='340' side='right'caption='[[1al4]], [[Resolution|resolution]] 1.13&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1al4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Brevibacillus_brevis Brevibacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AL4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1AL4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1al4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Brevibacillus_brevis Brevibacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AL4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AL4 FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=POL:N-PROPANOL'>POL</scene><br>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.13&#8491;</td></tr>
-
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=DLE:D-LEUCINE'>DLE</scene>, <scene name='pdbligand=DVA:D-VALINE'>DVA</scene>, <scene name='pdbligand=ETA:ETHANOLAMINE'>ETA</scene>, <scene name='pdbligand=FVA:N-FORMYL-L-VALINE'>FVA</scene>, <scene name='pdbligand=QIL:N-FORMYL-L-ISOLEUCINE'>QIL</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DLE:D-LEUCINE'>DLE</scene>, <scene name='pdbligand=DVA:D-VALINE'>DVA</scene>, <scene name='pdbligand=ETA:ETHANOLAMINE'>ETA</scene>, <scene name='pdbligand=FVA:N-FORMYL-L-VALINE'>FVA</scene>, <scene name='pdbligand=POL:N-PROPANOL'>POL</scene>, <scene name='pdbligand=PRD_000152:GRAMICIDIN+D'>PRD_000152</scene>, <scene name='pdbligand=QIL:N-FORMYL-L-ISOLEUCINE'>QIL</scene></td></tr>
-
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1tk2|1tk2]], [[2xdc|2xdc]], [[1av2|1av2]], [[1bdw|1bdw]], [[1c4d|1c4d]], [[1gmk|1gmk]], [[1grm|1grm]], [[1jno|1jno]], [[1kqe|1kqe]], [[1mag|1mag]], [[1mic|1mic]], [[1ng8|1ng8]], [[1nrm|1nrm]], [[1nru|1nru]], [[1nt5|1nt5]], [[1jo3|1jo3]], [[1jo4|1jo4]], [[1nt6|1nt6]], [[1tkq|1tkq]], [[1w5u|1w5u]], [[2izq|2izq]], [[3l8l|3l8l]], [[1alx|1alx]], [[1alz|1alz]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1al4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1al4 OCA], [https://pdbe.org/1al4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1al4 RCSB], [https://www.ebi.ac.uk/pdbsum/1al4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1al4 ProSAT]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1al4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1al4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1al4 RCSB], [http://www.ebi.ac.uk/pdbsum/1al4 PDBsum]</span></td></tr>
+
</table>
-
<table>
+
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 16: Line 16:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 1al4" style="background-color:#fffaf0;"></div>
==See Also==
==See Also==
Line 24: Line 25:
</StructureSection>
</StructureSection>
[[Category: Brevibacillus brevis]]
[[Category: Brevibacillus brevis]]
-
[[Category: Burkhart, B M.]]
+
[[Category: Large Structures]]
-
[[Category: Duax, W L.]]
+
[[Category: Burkhart BM]]
-
[[Category: Gassman, R M.]]
+
[[Category: Duax WL]]
-
[[Category: Pangborn, W A.]]
+
[[Category: Gassman RM]]
-
[[Category: Antibacterial]]
+
[[Category: Pangborn WA]]
-
[[Category: Antibiotic]]
+
-
[[Category: Antifungal]]
+
-
[[Category: Linear gramicidin]]
+
-
[[Category: Membrane ion channel]]
+

Current revision

GRAMICIDIN D FROM BACILLUS BREVIS (N-PROPANOL SOLVATE)

PDB ID 1al4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools