This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ijk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:06, 2 August 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3ijk.jpg|left|200px]]
 
-
<!--
+
==5-OMe modified DNA 8mer==
-
The line below this paragraph, containing "STRUCTURE_3ijk", creates the "Structure Box" on the page.
+
<StructureSection load='3ijk' size='340' side='right'caption='[[3ijk]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ijk]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IJK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IJK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=T5O:2-DEOXY-5-METHOXYURIDINE+5-(DIHYDROGEN+PHOSPHATE)'>T5O</scene>, <scene name='pdbligand=UMS:2-METHYLSELENYL-2-DEOXYURIDINE-5-PHOSPHATE'>UMS</scene></td></tr>
-
{{STRUCTURE_3ijk| PDB=3ijk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ijk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ijk OCA], [https://pdbe.org/3ijk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ijk RCSB], [https://www.ebi.ac.uk/pdbsum/3ijk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ijk ProSAT]</span></td></tr>
-
 
+
</table>
-
===5-OMe modified DNA 8mer===
+
__TOC__
-
 
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
==About this Structure==
+
[[Category: Gan J]]
-
3IJK is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IJK OCA].
+
[[Category: Hassan AEA]]
-
[[Category: Gan, J.]]
+
[[Category: Huang Z]]
-
[[Category: Hassan, A E.A.]]
+
[[Category: Sheng J]]
-
[[Category: Huang, Z.]]
+
[[Category: Zhang W]]
-
[[Category: Sheng, J.]]
+
-
[[Category: Zhang, W.]]
+
-
[[Category: 5-methoxy-uridine]]
+
-
[[Category: Dna]]
+
-
[[Category: Selenium]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 7 14:13:16 2009''
+

Current revision

5-OMe modified DNA 8mer

PDB ID 3ijk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools