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5gs5

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(New page: '''Unreleased structure''' The entry 5gs5 is ON HOLD Authors: Zhang, H., Han, M.J., Tao, J.L., Ye, Z.Y., Du, X.X., Deng, M.J., Zhang, X.Y., Li, L.F., Jiang, Z.F., Su, X.D. Description:...)
Current revision (11:40, 2 August 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5gs5 is ON HOLD
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==Crystal structure of apo rat STING==
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<StructureSection load='5gs5' size='340' side='right'caption='[[5gs5]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5gs5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GS5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GS5 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gs5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gs5 OCA], [https://pdbe.org/5gs5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gs5 RCSB], [https://www.ebi.ac.uk/pdbsum/5gs5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gs5 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/STING_RAT STING_RAT] Facilitator of innate immune signaling that acts as a sensor of cytosolic DNA from bacteria and viruses and promotes the production of type I interferon (IFN-alpha and IFN-beta). Innate immune response is triggered in response to non-CpG double-stranded DNA from viruses and bacteria delivered to the cytoplasm. Acts by recognizing and binding cyclic di-GMP (c-di-GMP), a second messenger produced by bacteria, and cyclic GMP-AMP (cGAMP), a messenger produced in response to DNA virus in the cytosol: upon binding of c-di-GMP or cGAMP, autoinhibition is alleviated and TMEM173/STING is able to activate both NF-kappa-B and IRF3 transcription pathways to induce expression of type I interferon and exert a potent anti-viral state (PubMed:26669264). May be involved in translocon function, the translocon possibly being able to influence the induction of type I interferons. May be involved in transduction of apoptotic signals via its association with the major histocompatibility complex class II (MHC-II). Mediates death signaling via activation of the extracellular signal-regulated kinase (ERK) pathway (By similarity). Exhibits 2',3' phosphodiester linkage-specific ligand recognition. Can bind both 2'-3' linked cGAMP and 3'-3' linked cGAMP; the precise binding affinity may be species-specific and rat TMEM173/STING is preferentially activated by 3'-3' linked cGAMP (PubMed:26669264).[UniProtKB:Q86WV6]<ref>PMID:26669264</ref>
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Authors: Zhang, H., Han, M.J., Tao, J.L., Ye, Z.Y., Du, X.X., Deng, M.J., Zhang, X.Y., Li, L.F., Jiang, Z.F., Su, X.D.
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==See Also==
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*[[Stimulator of interferon genes protein|Stimulator of interferon genes protein]]
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Description: Crystal structure of apo rat STING
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== References ==
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[[Category: Unreleased Structures]]
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<references/>
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[[Category: Zhang, H]]
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__TOC__
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[[Category: Li, L.F]]
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</StructureSection>
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[[Category: Deng, M.J]]
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[[Category: Large Structures]]
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[[Category: Du, X.X]]
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[[Category: Rattus norvegicus]]
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[[Category: Han, M.J]]
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[[Category: Deng MJ]]
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[[Category: Zhang, X.Y]]
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[[Category: Du XX]]
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[[Category: Su, X.D]]
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[[Category: Han MJ]]
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[[Category: Ye, Z.Y]]
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[[Category: Jiang ZF]]
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[[Category: Jiang, Z.F]]
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[[Category: Li LF]]
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[[Category: Tao, J.L]]
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[[Category: Su XD]]
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[[Category: Tao JL]]
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[[Category: Ye ZY]]
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[[Category: Zhang H]]
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[[Category: Zhang XY]]

Current revision

Crystal structure of apo rat STING

PDB ID 5gs5

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