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5gsz

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Crystal Structure of the KIF19A Motor Domain Complexed with Mg-ADP

Structural highlights

5gsz is a 1 chain structure with sequence from Mus musculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 2.72Å
Ligands:	,
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

KIF19_MOUSE Plus end-directed microtubule-dependent motor protein that regulates the length of motile cilia by mediating depolymerization of microtubules at ciliary tips.^[1]

Publication Abstract from PubMed

The kinesin-8 motor, KIF19A, accumulates at cilia tips and controls cilium length. Defective KIF19A leads to hydrocephalus and female infertility because of abnormally elongated cilia. Uniquely among kinesins, KIF19A possesses the dual functions of motility along ciliary microtubules and depolymerization of microtubules. To elucidate the molecular mechanisms of these functions we solved the crystal structure of its motor domain and determined its cryo-electron microscopy structure complexed with a microtubule. The features of KIF19A that enable its dual function are clustered on its microtubule-binding side. Unexpectedly, a destabilized switch II coordinates with a destabilized L8 to enable KIF19A to adjust to both straight and curved microtubule protofilaments. The basic clusters of L2 and L12 tether the microtubule. The long L2 with a characteristic acidic-hydrophobic-basic sequence effectively stabilizes the curved conformation of microtubule ends. Hence, KIF19A utilizes multiple strategies to accomplish the dual functions of motility and microtubule depolymerization by ATP hydrolysis.

Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A.,Wang D, Nitta R, Morikawa M, Yajima H, Inoue S, Shigematsu H, Kikkawa M, Hirokawa N Elife. 2016 Sep 30;5. pii: e18101. doi: 10.7554/eLife.18101. PMID:27690357^[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Niwa S, Nakajima K, Miki H, Minato Y, Wang D, Hirokawa N. KIF19A is a microtubule-depolymerizing kinesin for ciliary length control. Dev Cell. 2012 Dec 11;23(6):1167-75. doi: 10.1016/j.devcel.2012.10.016. Epub 2012, Nov 15. PMID:23168168 doi:http://dx.doi.org/10.1016/j.devcel.2012.10.016
↑ Wang D, Nitta R, Morikawa M, Yajima H, Inoue S, Shigematsu H, Kikkawa M, Hirokawa N. Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A. Elife. 2016 Sep 30;5. pii: e18101. doi: 10.7554/eLife.18101. PMID:27690357 doi:http://dx.doi.org/10.7554/eLife.18101

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 See Also
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5gsz"

Categories: Large Structures | Mus musculus | Hirokawa N | Nitta R | Wang D

@@ Line 1: / Line 1: @@
 ==Crystal Structure of the KIF19A Motor Domain Complexed with Mg-ADP==
-<StructureSection load='5gsz' size='340' side='right' caption='[[5gsz]], [[Resolution|resolution]] 2.72&Aring;' scene=''>
+<StructureSection load='5gsz' size='340' side='right'caption='[[5gsz]], [[Resolution|resolution]] 2.72&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5gsz]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GSZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GSZ FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5gsz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GSZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5GSZ FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.72&#8491;</td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gsz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gsz OCA], [http://pdbe.org/5gsz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gsz RCSB], [http://www.ebi.ac.uk/pdbsum/5gsz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gsz ProSAT]</span></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5gsz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gsz OCA], [https://pdbe.org/5gsz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5gsz RCSB], [https://www.ebi.ac.uk/pdbsum/5gsz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5gsz ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/KIF19_MOUSE KIF19_MOUSE]] Plus end-directed microtubule-dependent motor protein that regulates the length of motile cilia by mediating depolymerization of microtubules at ciliary tips.<ref>PMID:23168168</ref>
+[https://www.uniprot.org/uniprot/KIF19_MOUSE KIF19_MOUSE] Plus end-directed microtubule-dependent motor protein that regulates the length of motile cilia by mediating depolymerization of microtubules at ciliary tips.<ref>PMID:23168168</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 18: / Line 19: @@
 </div>
 <div class="pdbe-citations 5gsz" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Kinesin 3D Structures|Kinesin 3D Structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Hirokawa, N]]
+[[Category: Large Structures]]
-[[Category: Nitta, R]]
+[[Category: Mus musculus]]
-[[Category: Wang, D]]
+[[Category: Hirokawa N]]
-[[Category: Kinesin]]
+[[Category: Nitta R]]
-[[Category: Mg-adp]]
+[[Category: Wang D]]
-[[Category: Motor domain]]
-[[Category: Motor protein]]

5gsz

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Current revision

Crystal Structure of the KIF19A Motor Domain Complexed with Mg-ADP

Structural highlights

Function

Publication Abstract from PubMed

See Also

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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