This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1bsf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:42, 9 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1bsf' size='340' side='right'caption='[[1bsf]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='1bsf' size='340' side='right'caption='[[1bsf]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1bsf]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"vibrio_subtilis"_ehrenberg_1835 "vibrio subtilis" ehrenberg 1835]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BSF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1BSF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1bsf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BSF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BSF FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">THYA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Vibrio subtilis" Ehrenberg 1835])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thymidylate_synthase Thymidylate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.45 2.1.1.45] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bsf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bsf OCA], [https://pdbe.org/1bsf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bsf RCSB], [https://www.ebi.ac.uk/pdbsum/1bsf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bsf ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1bsf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bsf OCA], [http://pdbe.org/1bsf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1bsf RCSB], [http://www.ebi.ac.uk/pdbsum/1bsf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1bsf ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TYSY1_BACSU TYSY1_BACSU] Catalyzes the reductive methylation of 2'-deoxyuridine-5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.[HAMAP-Rule:MF_00008]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 34: Line 35:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Vibrio subtilis ehrenberg 1835]]
+
[[Category: Bacillus subtilis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Thymidylate synthase]]
+
[[Category: Santi DV]]
-
[[Category: Santi, D V]]
+
[[Category: Schellenberger U]]
-
[[Category: Schellenberger, U]]
+
[[Category: Stout TJ]]
-
[[Category: Stout, T J]]
+
[[Category: Stroud RM]]
-
[[Category: Stroud, R M]]
+
-
[[Category: Dtmp synthase]]
+
-
[[Category: Methyltransferase]]
+

Current revision

THERMOSTABLE THYMIDYLATE SYNTHASE A FROM BACILLUS SUBTILIS

PDB ID 1bsf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools