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1jl5

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==Novel Molecular Architecture of YopM-a Leucine-rich Effector Protein from Yersinia pestis==
==Novel Molecular Architecture of YopM-a Leucine-rich Effector Protein from Yersinia pestis==
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<StructureSection load='1jl5' size='340' side='right' caption='[[1jl5]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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<StructureSection load='1jl5' size='340' side='right'caption='[[1jl5]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1jl5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pestis"_(lehmann_and_neumann_1896)_migula_1900 "bacillus pestis" (lehmann and neumann 1896) migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JL5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1JL5 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1jl5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JL5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JL5 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1g9u|1g9u]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YopM ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 "Bacillus pestis" (Lehmann and Neumann 1896) Migula 1900])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jl5 OCA], [https://pdbe.org/1jl5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jl5 RCSB], [https://www.ebi.ac.uk/pdbsum/1jl5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jl5 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jl5 OCA], [http://pdbe.org/1jl5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1jl5 RCSB], [http://www.ebi.ac.uk/pdbsum/1jl5 PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/YOPM_YERPE YOPM_YERPE]] Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues (By similarity).
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[https://www.uniprot.org/uniprot/YOPM_YERPE YOPM_YERPE] Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jl/1jl5_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jl/1jl5_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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==See Also==
==See Also==
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*[[Amylase|Amylase]]
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*[[Amylase 3D structures|Amylase 3D structures]]
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*[[User:Gabriel Pons/Sandbox 2|User:Gabriel Pons/Sandbox 2]]
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== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Anderson, D E]]
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[[Category: Large Structures]]
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[[Category: Evdokimov, A G]]
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[[Category: Yersinia pestis]]
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[[Category: Routzahn, K M]]
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[[Category: Anderson DE]]
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[[Category: Waugh, D S]]
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[[Category: Evdokimov AG]]
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[[Category: Effector protein]]
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[[Category: Routzahn KM]]
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[[Category: Leucine-rich repeat]]
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[[Category: Waugh DS]]
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[[Category: Molecular pathogenesis]]
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[[Category: Toxin]]
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[[Category: Virulence factor]]
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Current revision

Novel Molecular Architecture of YopM-a Leucine-rich Effector Protein from Yersinia pestis

PDB ID 1jl5

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