This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1nbu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:18, 16 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1nbu' size='340' side='right'caption='[[1nbu]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='1nbu' size='340' side='right'caption='[[1nbu]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1nbu]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NBU OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1NBU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1nbu]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NBU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NBU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PH2:2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE'>PH2</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FOLB OR RV3607C OR MT3712.1 OR MTCY07H7B.15 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PH2:2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE'>PH2</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydroneopterin_aldolase Dihydroneopterin aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.25 4.1.2.25] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nbu OCA], [https://pdbe.org/1nbu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nbu RCSB], [https://www.ebi.ac.uk/pdbsum/1nbu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nbu ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1nbu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nbu OCA], [http://pdbe.org/1nbu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1nbu RCSB], [http://www.ebi.ac.uk/pdbsum/1nbu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1nbu ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/FOLB_MYCTU FOLB_MYCTU]] Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin (By similarity).
+
[https://www.uniprot.org/uniprot/FOLB_MYCTU FOLB_MYCTU] Catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 34: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Dihydroneopterin aldolase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Apostol, M I]]
+
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Eisenberg, D]]
+
[[Category: Apostol MI]]
-
[[Category: Goulding, C W]]
+
[[Category: Eisenberg D]]
-
[[Category: Parseghian, A]]
+
[[Category: Goulding CW]]
-
[[Category: Phillips, M]]
+
[[Category: Parseghian A]]
-
[[Category: Sawaya, M R]]
+
[[Category: Phillips M]]
-
[[Category: Structural genomic]]
+
[[Category: Sawaya MR]]
-
[[Category: Anti-parallel]]
+
-
[[Category: Beta-sheet]]
+
-
[[Category: Lyase]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Tbsgc]]
+
-
[[Category: Two alpha helice]]
+

Current revision

7,8-Dihydroneopterin Aldolase Complexed with Product From Mycobacterium Tuberculosis

PDB ID 1nbu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools