This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1om6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 16 August 2023) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
 +
==CRYSTAL STRUCTURE OF A COLD ADAPTED ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18, CO-CRYSTALLIZED WITH 5mM EDTA (2 MONTHS)==
==CRYSTAL STRUCTURE OF A COLD ADAPTED ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18, CO-CRYSTALLIZED WITH 5mM EDTA (2 MONTHS)==
-
<StructureSection load='1om6' size='340' side='right' caption='[[1om6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='1om6' size='340' side='right'caption='[[1om6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1om6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp._'tac_ii_18' Pseudomonas sp. 'tac ii 18']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OM6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OM6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1om6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._'TAC_II_18' Pseudomonas sp. 'TAC II 18']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OM6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OM6 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1g9k|1g9k]], [[1h71|1h71]], [[1kap|1kap]], [[1smp|1smp]], [[1o0q|1o0q]], [[1o0t|1o0t]], [[1om7|1om7]], [[1om8|1om8]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serralysin Serralysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.40 3.4.24.40] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1om6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1om6 OCA], [https://pdbe.org/1om6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1om6 RCSB], [https://www.ebi.ac.uk/pdbsum/1om6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1om6 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1om6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1om6 OCA], [http://pdbe.org/1om6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1om6 RCSB], [http://www.ebi.ac.uk/pdbsum/1om6 PDBsum]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O69771_9PSED O69771_9PSED]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/1om6_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/1om6_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pseudomonas sp. 'tac ii 18']]
+
[[Category: Large Structures]]
-
[[Category: Serralysin]]
+
[[Category: Pseudomonas sp. 'TAC II 18']]
-
[[Category: Aghajari, N]]
+
[[Category: Aghajari N]]
-
[[Category: Gouet, P]]
+
[[Category: Gouet P]]
-
[[Category: Haser, R]]
+
[[Category: Haser R]]
-
[[Category: Ravaud, S]]
+
[[Category: Ravaud S]]
-
[[Category: Beta jelly roll]]
+
-
[[Category: Hydrolase]]
+

Current revision

CRYSTAL STRUCTURE OF A COLD ADAPTED ALKALINE PROTEASE FROM PSEUDOMONAS TAC II 18, CO-CRYSTALLIZED WITH 5mM EDTA (2 MONTHS)

PDB ID 1om6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1om6"
Personal tools