1pb0

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[[Image:1pb0.jpg|left|200px]]
 
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{{Structure
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==YCDX PROTEIN IN AUTOINHIBITED STATE==
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|PDB= 1pb0 |SIZE=350|CAPTION= <scene name='initialview01'>1pb0</scene>, resolution 1.95&Aring;
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<StructureSection load='1pb0' size='340' side='right'caption='[[1pb0]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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<table><tr><td colspan='2'>[[1pb0]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PB0 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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|GENE= YCDX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pb0 OCA], [https://pdbe.org/1pb0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pb0 RCSB], [https://www.ebi.ac.uk/pdbsum/1pb0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pb0 ProSAT]</span></td></tr>
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|RELATEDENTRY=[[1m65|1M65]], [[1m68|1M68]]
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pb0 OCA], [http://www.ebi.ac.uk/pdbsum/1pb0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pb0 RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/YCDX_ECOLI YCDX_ECOLI] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.<ref>PMID:21965574</ref>
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== Evolutionary Conservation ==
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'''YCDX PROTEIN IN AUTOINHIBITED STATE'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pb/1pb0_consurf.spt"</scriptWhenChecked>
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1PB0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PB0 OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==Reference==
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</jmolCheckbox>
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Crystal structure of the Escherichia coli YcdX protein reveals a trinuclear zinc active site., Teplyakov A, Obmolova G, Khil PP, Howard AJ, Camerini-Otero RD, Gilliland GL, Proteins. 2003 May 1;51(2):315-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12661000 12661000]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pb0 ConSurf].
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<div style="clear:both"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Camerini-Otero, R D.]]
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[[Category: Camerini-Otero RD]]
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[[Category: Gilliland, G L.]]
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[[Category: Gilliland GL]]
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[[Category: Khil, P P.]]
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[[Category: Khil PP]]
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[[Category: Obmolova, G.]]
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[[Category: Obmolova G]]
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[[Category: Teplyakov, A.]]
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[[Category: Teplyakov A]]
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[[Category: autoinhibition]]
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[[Category: beta-alpha-barrel]]
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[[Category: structural genomic]]
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[[Category: trinuclear zinc]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:57:20 2008''
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Current revision

YCDX PROTEIN IN AUTOINHIBITED STATE

PDB ID 1pb0

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