1pb0
From Proteopedia
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(New page: 200px<br /><applet load="1pb0" size="450" color="white" frame="true" align="right" spinBox="true" caption="1pb0, resolution 1.95Å" /> '''YCDX PROTEIN IN AUTO...) |
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| - | [[Image:1pb0.jpg|left|200px]]<br /><applet load="1pb0" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1pb0, resolution 1.95Å" /> | ||
| - | '''YCDX PROTEIN IN AUTOINHIBITED STATE'''<br /> | ||
| - | == | + | ==YCDX PROTEIN IN AUTOINHIBITED STATE== |
| - | + | <StructureSection load='1pb0' size='340' side='right'caption='[[1pb0]], [[Resolution|resolution]] 1.95Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[1pb0]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PB0 FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr> | |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pb0 OCA], [https://pdbe.org/1pb0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pb0 RCSB], [https://www.ebi.ac.uk/pdbsum/1pb0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pb0 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/YCDX_ECOLI YCDX_ECOLI] Hydrolyzes p-nitrophenyl phosphate (pNPP) in vitro. Involved in the swarming motility process.<ref>PMID:21965574</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pb/1pb0_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pb0 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Camerini-Otero | + | [[Category: Camerini-Otero RD]] |
| - | [[Category: Gilliland | + | [[Category: Gilliland GL]] |
| - | [[Category: Khil | + | [[Category: Khil PP]] |
| - | [[Category: Obmolova | + | [[Category: Obmolova G]] |
| - | [[Category: Teplyakov | + | [[Category: Teplyakov A]] |
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Current revision
YCDX PROTEIN IN AUTOINHIBITED STATE
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