This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2xd9
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 2xd9 is ON HOLD until sometime in the future Authors: Paz, S., Tizon, L., Otero, J.M., Llamas-Saiz, A.L., Fox, G.C., van Raaij, M.J., Lamb, H., Hawk...) |
|||
| (11 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==STRUCTURE OF HELICOBACTER PYLORI TYPE II DEHYDROQUINASE IN COMPLEX WITH INHIBITOR COMPOUND (4R,6R,7S)-4,6,7-Trihydroxy-2-((E)-prop-1- enyl)-4,5,6,7-tetrahydrobenzo(b)thiophene-4-carboxylic acid== | |
| + | <StructureSection load='2xd9' size='340' side='right'caption='[[2xd9]], [[Resolution|resolution]] 1.95Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2xd9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XD9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XD9 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=XD9:(4R,6R,7S)-4,6,7-TRIHYDROXY-2-[(1E)-PROP-1-EN-1-YL]-4,5,6,7-TETRAHYDRO-1-BENZOTHIOPHENE-4-CARBOXYLIC+ACID'>XD9</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xd9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xd9 OCA], [https://pdbe.org/2xd9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xd9 RCSB], [https://www.ebi.ac.uk/pdbsum/2xd9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xd9 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/AROQ_HELPY AROQ_HELPY] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169] | ||
| - | + | ==See Also== | |
| - | + | *[[Dehydroquinase 3D structures|Dehydroquinase 3D structures]] | |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Helicobacter pylori]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Castedo L]] | ||
| + | [[Category: Fox GC]] | ||
| + | [[Category: Gonzalez-Bello C]] | ||
| + | [[Category: Hawkins AR]] | ||
| + | [[Category: Lamb H]] | ||
| + | [[Category: Lapthorn AJ]] | ||
| + | [[Category: Llamas-Saiz AL]] | ||
| + | [[Category: Otero JM]] | ||
| + | [[Category: Paz S]] | ||
| + | [[Category: Tizon L]] | ||
| + | [[Category: Van Raaij MJ]] | ||
Current revision
STRUCTURE OF HELICOBACTER PYLORI TYPE II DEHYDROQUINASE IN COMPLEX WITH INHIBITOR COMPOUND (4R,6R,7S)-4,6,7-Trihydroxy-2-((E)-prop-1- enyl)-4,5,6,7-tetrahydrobenzo(b)thiophene-4-carboxylic acid
| |||||||||||
Categories: Helicobacter pylori | Large Structures | Castedo L | Fox GC | Gonzalez-Bello C | Hawkins AR | Lamb H | Lapthorn AJ | Llamas-Saiz AL | Otero JM | Paz S | Tizon L | Van Raaij MJ
