This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1s0q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1s0q" size="450" color="white" frame="true" align="right" spinBox="true" caption="1s0q, resolution 1.02&Aring;" /> '''Native Bovine Pancre...)
Current revision (06:10, 23 August 2023) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1s0q.gif|left|200px]]<br /><applet load="1s0q" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1s0q, resolution 1.02&Aring;" />
 
-
'''Native Bovine Pancreatic Trypsin'''<br />
 
-
==About this Structure==
+
==Native Bovine Pancreatic Trypsin==
-
1S0Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with CA as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1S0Q OCA].
+
<StructureSection load='1s0q' size='340' side='right'caption='[[1s0q]], [[Resolution|resolution]] 1.02&Aring;' scene=''>
-
[[Category: Bos taurus]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1s0q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S0Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S0Q FirstGlance]. <br>
-
[[Category: Trypsin]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.02&#8491;</td></tr>
-
[[Category: Garcia-Granda, S.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
[[Category: Gavilanes, J.A.Chamorro.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s0q OCA], [https://pdbe.org/1s0q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s0q RCSB], [https://www.ebi.ac.uk/pdbsum/1s0q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s0q ProSAT]</span></td></tr>
-
[[Category: CA]]
+
</table>
-
[[Category: atomic resolution]]
+
== Function ==
-
[[Category: native]]
+
[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
-
[[Category: trypsin]]
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s0/1s0q_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s0q ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 02:01:09 2007''
+
==See Also==
 +
*[[Trypsin 3D structures|Trypsin 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bos taurus]]
 +
[[Category: Large Structures]]
 +
[[Category: Chamorro Gavilanes JA]]
 +
[[Category: Garcia-Granda S]]

Current revision

Native Bovine Pancreatic Trypsin

PDB ID 1s0q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools