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1s5i
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="1s5i" size="450" color="white" frame="true" align="right" spinBox="true" caption="1s5i, resolution 2.7Å" /> '''Fab (LNKB-2) of mono...) |
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| - | [[Image:1s5i.gif|left|200px]]<br /> | ||
| - | <applet load="1s5i" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1s5i, resolution 2.7Å" /> | ||
| - | '''Fab (LNKB-2) of monoclonal antibody to Human Interleukin-2, crystal structure'''<br /> | ||
| - | == | + | ==Fab (LNKB-2) of monoclonal antibody to Human Interleukin-2, crystal structure== |
| - | + | <StructureSection load='1s5i' size='340' side='right'caption='[[1s5i]], [[Resolution|resolution]] 2.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[1s5i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S5I FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s5i OCA], [https://pdbe.org/1s5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s5i RCSB], [https://www.ebi.ac.uk/pdbsum/1s5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s5i ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/IGH1M_MOUSE IGH1M_MOUSE] | |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | [[ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s5/1s5i_consurf.spt"</scriptWhenChecked> |
| - | [ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s5i ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The three-dimensional structure of the antigen-binding fragment of a monoclonal antibody to human interleukin-2 in a new crystal form (space group P2(1)2(1)2(1); unit cell parameters: a = 42.82, b = 90.68, and c = 139.82 A) was determined by the X-ray molecular replacement method at the resolution of 2.7 A. The protein folding and the stereochemistry of its antigen-binding site were comparatively analyzed. The English version of the paper: Russian Journal of Bioorganic Chemistry, 2004, vol. 30, no. 5; see also http: // www.maik.ru. | ||
| - | + | [A new crystal form of the Fab fragment of a monoclonal antibody to human interleukin-2: the three-dimensional structure at 2.7 A resolution].,Pletnev VZ, Goriacheva EA, Tsygannik IN, Nesmeianov VA, Pletnev SV, Pangborn W, Daux W Bioorg Khim. 2004 Sep-Oct;30(5):466-9. PMID:15562966<ref>PMID:15562966</ref> | |
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 1s5i" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Mus musculus]] | ||
| + | [[Category: Duax W]] | ||
| + | [[Category: Goryacheva EA]] | ||
| + | [[Category: Nesmeyanov VA]] | ||
| + | [[Category: Pangborn W]] | ||
| + | [[Category: Pletnev SV]] | ||
| + | [[Category: Pletnev VZ]] | ||
| + | [[Category: Tsygannik IN]] | ||
Current revision
Fab (LNKB-2) of monoclonal antibody to Human Interleukin-2, crystal structure
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