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1sbk
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1sbk" size="450" color="white" frame="true" align="right" spinBox="true" caption="1sbk, resolution 2.00Å" /> '''X-RAY STRUCTURE OF Y...) |
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| - | [[Image:1sbk.gif|left|200px]]<br /><applet load="1sbk" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1sbk, resolution 2.00Å" /> | ||
| - | '''X-RAY STRUCTURE OF YDII_ECOLI NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER29.'''<br /> | ||
| - | == | + | ==X-RAY STRUCTURE OF YDII_ECOLI NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER29.== |
| - | + | <StructureSection load='1sbk' size='340' side='right'caption='[[1sbk]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[1sbk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SBK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SBK FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sbk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sbk OCA], [https://pdbe.org/1sbk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sbk RCSB], [https://www.ebi.ac.uk/pdbsum/1sbk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sbk ProSAT], [https://www.topsan.org/Proteins/NESGC/1sbk TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/MENI_ECOLI MENI_ECOLI] Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA). Also shows significant activity toward a wide range of acyl-CoA thioesters, and minimal activity toward benzoyl-holoEntB.<ref>PMID:15808744</ref> <ref>PMID:23564174</ref> <ref>PMID:24992697</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sb/1sbk_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sbk ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Acton | + | [[Category: Acton TB]] |
| - | [[Category: Chiang | + | [[Category: Chiang Y]] |
| - | [[Category: Edstrom | + | [[Category: Edstrom W]] |
| - | [[Category: Forouhar | + | [[Category: Forouhar F]] |
| - | [[Category: Hunt | + | [[Category: Hunt JF]] |
| - | [[Category: Kuzin | + | [[Category: Kuzin AP]] |
| - | [[Category: Lee | + | [[Category: Lee I]] |
| - | [[Category: Ma | + | [[Category: Ma L]] |
| - | [[Category: Montelione | + | [[Category: Montelione GT]] |
| - | + | [[Category: Rong X]] | |
| - | [[Category: Rong | + | [[Category: Tong L]] |
| - | [[Category: Tong | + | [[Category: Vorobiev SM]] |
| - | [[Category: Vorobiev | + | |
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Current revision
X-RAY STRUCTURE OF YDII_ECOLI NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER29.
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Categories: Escherichia coli | Large Structures | Acton TB | Chiang Y | Edstrom W | Forouhar F | Hunt JF | Kuzin AP | Lee I | Ma L | Montelione GT | Rong X | Tong L | Vorobiev SM
