This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1twl
From Proteopedia
(Difference between revisions)
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1twl.gif|left|200px]]<br /><applet load="1twl" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1twl, resolution 2.201Å" /> | ||
| - | '''Inorganic pyrophosphatase from Pyrococcus furiosus Pfu-264096-001'''<br /> | ||
| - | == | + | ==Inorganic pyrophosphatase from Pyrococcus furiosus Pfu-264096-001== |
| - | + | <StructureSection load='1twl' size='340' side='right'caption='[[1twl]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[1twl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TWL FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.201Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1twl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1twl OCA], [https://pdbe.org/1twl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1twl RCSB], [https://www.ebi.ac.uk/pdbsum/1twl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1twl ProSAT], [https://www.topsan.org/Proteins/SECSG/1twl TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/IPYR_PYRFU IPYR_PYRFU] | |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | + | Check<jmol> | |
| - | [ | + | <jmolCheckbox> |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tw/1twl_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1twl ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| - | [ | + | |
| - | + | ||
| - | + | ||
| - | [[ | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | [ | + | |
| - | [[ | + | |
| - | [ | + | |
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Inorganic pyrophosphatase 3D structures|Inorganic pyrophosphatase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Pyrococcus furiosus]] | ||
| + | [[Category: Adams MWW]] | ||
| + | [[Category: Arendall III WB]] | ||
| + | [[Category: Chen L]] | ||
| + | [[Category: Clancy Kelley L-L]] | ||
| + | [[Category: Dillard BD]] | ||
| + | [[Category: Eneh JC]] | ||
| + | [[Category: Hopkins RC]] | ||
| + | [[Category: Jenney Jr FE]] | ||
| + | [[Category: Lee HS]] | ||
| + | [[Category: Li T]] | ||
| + | [[Category: Liu Z-J]] | ||
| + | [[Category: Poole II FL]] | ||
| + | [[Category: Richardson DC]] | ||
| + | [[Category: Richardson JS]] | ||
| + | [[Category: Rose JP]] | ||
| + | [[Category: Shah C]] | ||
| + | [[Category: Sugar FJ]] | ||
| + | [[Category: Tempel W]] | ||
| + | [[Category: Wang B-C]] | ||
| + | [[Category: Zhou W]] | ||
Current revision
Inorganic pyrophosphatase from Pyrococcus furiosus Pfu-264096-001
| |||||||||||
Categories: Large Structures | Pyrococcus furiosus | Adams MWW | Arendall III WB | Chen L | Clancy Kelley L-L | Dillard BD | Eneh JC | Hopkins RC | Jenney Jr FE | Lee HS | Li T | Liu Z-J | Poole II FL | Richardson DC | Richardson JS | Rose JP | Shah C | Sugar FJ | Tempel W | Wang B-C | Zhou W

