This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xhl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:45, 23 August 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1xhl.png|left|200px]]
 
-
<!--
+
==Crystal Structure of putative Tropinone Reductase-II from Caenorhabditis Elegans with Cofactor and Substrate==
-
The line below this paragraph, containing "STRUCTURE_1xhl", creates the "Structure Box" on the page.
+
<StructureSection load='1xhl' size='340' side='right'caption='[[1xhl]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1xhl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XHL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>, <scene name='pdbligand=TNE:8-METHYL-8-AZABICYCLO[3,2,1]OCTAN-3-ONE'>TNE</scene></td></tr>
-
{{STRUCTURE_1xhl| PDB=1xhl | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xhl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xhl OCA], [https://pdbe.org/1xhl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xhl RCSB], [https://www.ebi.ac.uk/pdbsum/1xhl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xhl ProSAT], [https://www.topsan.org/Proteins/SECSG/1xhl TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of putative Tropinone Reductase-II from Caenorhabditis Elegans with Cofactor and Substrate===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q19774_CAEEL Q19774_CAEEL]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1XHL is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XHL OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xh/1xhl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xhl ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Caenorhabditis elegans]]
[[Category: Caenorhabditis elegans]]
-
[[Category: Tropinone reductase II]]
+
[[Category: Large Structures]]
-
[[Category: Arabshahi, A.]]
+
[[Category: Arabshahi A]]
-
[[Category: Bray, T.]]
+
[[Category: Bray T]]
-
[[Category: Bunzel, R.]]
+
[[Category: Bunzel R]]
-
[[Category: Cao, Z.]]
+
[[Category: Cao Z]]
-
[[Category: Carson, M.]]
+
[[Category: Carson M]]
-
[[Category: Chen, Y J.]]
+
[[Category: Chen Y-J]]
-
[[Category: DeLucas, L.]]
+
[[Category: DeLucas L]]
-
[[Category: Gray, R.]]
+
[[Category: Gray R]]
-
[[Category: Huang, W Y.]]
+
[[Category: Huang W-Y]]
-
[[Category: Johnson, D.]]
+
[[Category: Johnson D]]
-
[[Category: Karpova, E.]]
+
[[Category: Karpova E]]
-
[[Category: Li, S.]]
+
[[Category: Li S]]
-
[[Category: Lin, G.]]
+
[[Category: Lin G]]
-
[[Category: Lu, S.]]
+
[[Category: Lu S]]
-
[[Category: Luan, C H.]]
+
[[Category: Luan C-H]]
-
[[Category: Luo, D.]]
+
[[Category: Luo D]]
-
[[Category: Luo, M.]]
+
[[Category: Luo M]]
-
[[Category: McKInstry, A.]]
+
[[Category: McKInstry A]]
-
[[Category: Nagy, L.]]
+
[[Category: Nagy L]]
-
[[Category: Qiu, S.]]
+
[[Category: Qiu S]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Schormann N]]
-
[[Category: Schormann, N.]]
+
[[Category: Shang Q]]
-
[[Category: Shang, Q.]]
+
[[Category: Symersky J]]
-
[[Category: Symersky, J.]]
+
[[Category: Tsao J]]
-
[[Category: Tsao, J.]]
+
[[Category: Zhang Y]]
-
[[Category: Zhang, Y.]]
+
[[Category: Zhou J]]
-
[[Category: Zhou, J.]]
+
-
[[Category: Parallel beta-sheet of seven strands in the order 3214567]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Scsg]]
+
-
[[Category: Secsg]]
+
-
[[Category: Seventh alpha-helix on top of beta-sheet]]
+
-
[[Category: Southeast collaboratory for structural genomic]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Three alpha-helices on either side of beta-sheet]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:34:16 2008''
+

Current revision

Crystal Structure of putative Tropinone Reductase-II from Caenorhabditis Elegans with Cofactor and Substrate

PDB ID 1xhl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools