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1ygg
From Proteopedia
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==Crystal structure of phosphoenolpyruvate carboxykinase from Actinobacillus succinogenes== | ==Crystal structure of phosphoenolpyruvate carboxykinase from Actinobacillus succinogenes== | ||
| - | <StructureSection load='1ygg' size='340' side='right' caption='[[1ygg]], [[Resolution|resolution]] 1.85Å' scene=''> | + | <StructureSection load='1ygg' size='340' side='right'caption='[[1ygg]], [[Resolution|resolution]] 1.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1ygg]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1ygg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinobacillus_succinogenes Actinobacillus succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YGG FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ygg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ygg OCA], [https://pdbe.org/1ygg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ygg RCSB], [https://www.ebi.ac.uk/pdbsum/1ygg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ygg ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PCKA_ACTSZ PCKA_ACTSZ] Involved in gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yg/1ygg_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yg/1ygg_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ygg ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
| - | *[[Phosphoenolpyruvate carboxykinase|Phosphoenolpyruvate carboxykinase]] | + | *[[Phosphoenolpyruvate carboxykinase 3D structures|Phosphoenolpyruvate carboxykinase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Actinobacillus succinogenes]] |
| - | [[Category: Delbaere | + | [[Category: Large Structures]] |
| - | [[Category: Laivenieks | + | [[Category: Delbaere LT]] |
| - | [[Category: Leduc | + | [[Category: Laivenieks M]] |
| - | [[Category: Prasad | + | [[Category: Leduc YA]] |
| - | [[Category: Zeikus | + | [[Category: Prasad L]] |
| - | + | [[Category: Zeikus JG]] | |
| - | + | ||
Current revision
Crystal structure of phosphoenolpyruvate carboxykinase from Actinobacillus succinogenes
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