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1yj1

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[[Image:1yj1.png|left|200px]]
 
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==X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin==
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The line below this paragraph, containing "STRUCTURE_1yj1", creates the "Structure Box" on the page.
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<StructureSection load='1yj1' size='340' side='right'caption='[[1yj1]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1yj1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YJ1 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=DGN:D-GLUTAMINE'>DGN</scene></td></tr>
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{{STRUCTURE_1yj1| PDB=1yj1 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yj1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yj1 OCA], [https://pdbe.org/1yj1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yj1 RCSB], [https://www.ebi.ac.uk/pdbsum/1yj1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yj1 ProSAT]</span></td></tr>
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</table>
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===X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin===
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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[[1yj1]] is a 3 chain structure of [[Ubiquitin]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YJ1 OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yj/1yj1_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yj1 ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Ubiquitin]]
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*[[3D structures of ubiquitin|3D structures of ubiquitin]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:15834850</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
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[[Category: Bang, D.]]
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[[Category: Large Structures]]
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[[Category: Kent, S B.]]
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[[Category: Bang D]]
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[[Category: Kossiakoff, A A.]]
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[[Category: Kent SB]]
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[[Category: Makhatadze, G I.]]
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[[Category: Kossiakoff AA]]
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[[Category: Tereshko, V.]]
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[[Category: Makhatadze GI]]
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[[Category: Structural protein]]
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[[Category: Tereshko V]]
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[[Category: Ubiquitin]]
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Current revision

X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin

PDB ID 1yj1

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