This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1zu0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:14, 23 August 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1zu0.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of the liganded Chitin Oligasaccharide Binding Protein==
-
|PDB= 1zu0 |SIZE=350|CAPTION= <scene name='initialview01'>1zu0</scene>, resolution 2.2&Aring;
+
<StructureSection load='1zu0' size='340' side='right'caption='[[1zu0]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CBS:DI(N-ACETYL-D-GLUCOSAMINE)'>CBS</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>
+
<table><tr><td colspan='2'>[[1zu0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZU0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZU0 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zu0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zu0 OCA], [https://pdbe.org/1zu0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zu0 RCSB], [https://www.ebi.ac.uk/pdbsum/1zu0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zu0 ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[1zty|1ZTY]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zu0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zu0 OCA], [http://www.ebi.ac.uk/pdbsum/1zu0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zu0 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q9KUA3_VIBCH Q9KUA3_VIBCH]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal Structure of the liganded Chitin Oligasaccharide Binding Protein'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zu/1zu0_consurf.spt"</scriptWhenChecked>
-
1ZU0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZU0 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zu0 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Vibrio cholerae]]
[[Category: Vibrio cholerae]]
-
[[Category: Li, X.]]
+
[[Category: Li X]]
-
[[Category: Roseman, R.]]
+
[[Category: Roseman R]]
-
[[Category: Stock, A M.]]
+
[[Category: Stock AM]]
-
[[Category: Xu, S.]]
+
[[Category: Xu S]]
-
[[Category: alpha helix/beta sheet]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:41:35 2008''
+

Current revision

Crystal Structure of the liganded Chitin Oligasaccharide Binding Protein

PDB ID 1zu0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1zu0"
Personal tools